Seriola dumerili (greater amberjack): 111220564
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Entry
111220564 CDS
T05606
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04141
Protein processing in endoplasmic reticulum
sdu04210
Apoptosis
sdu04217
Necroptosis
sdu04218
Cellular senescence
sdu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111220564
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111220564
04217 Necroptosis
111220564
04218 Cellular senescence
111220564
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111220564
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111220564
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
111220564
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C2: calpain family
111220564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
111220564
NCBI-ProteinID:
XP_022599396
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MHPAGGISATIYANRLRAEGMGSKEQAVRFSNQDYEALKQECVESGCLFEDPCFPAEPPS
LGFKELAPYSSKTRDVVWMRPTELTDDPQFIVDGATRTDICQGALGDCWLLAAIGSLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDTELMFVHSAEGNEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKPPRNLYRIIYKALERGSL
LGCSIDVSAKHTGAPSRHEHWCCTILRKPIRLKACLFISVPDNPYSDEDVMFLQITSAFD
MEAVTFKKLVKGHAYSVTGLKEVDFRGNMERLIRVRNPWGQVEWTGAWSDNAPEWDEIDP
SEREDLHLKMEDGEFWMSFSEFTRQFSRLEICNLTPDVLSDDGLSHWNTIKFYGTWRRGS
TAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRRYRHHGQDMHTI
GFALYEIPEEYRGCQNVHLKKNFFLNHSSCARSETFINLREVSTRLRLPPGEYLIVPSTF
EPGKEADFVLRVFTEKQSETEELDDEISANLADDEEITEDDIDDSFKSMFAQLAGEDMEI
SIHELRTILNRVVARHKDLKTDGFSMESCRTMVNLMDKDGSARLGLVEFQILWNKIRNWL
VVFRQFDLDKSGAMSSYEMRLAVEAAGFKLNNRLNQILVARYAENEMIDFDNFICCLVKL
EAMFRSFQQFDKEASGEAELNLTEWLYLTMCG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagccggagggatctctgctacgatatacgccaacaggctccgggcagaaggc
atgggctccaaggagcaggctgtgcgcttctccaaccaggactacgaagctctgaaacaa
gagtgtgtggagtcgggctgcctgtttgaagacccctgtttcccagctgagcctccatcc
ctgggcttcaaggagctcgccccctactcctccaaaactagagatgtggtgtggatgaga
cccacggaactgactgatgaccctcagttcattgtggatggcgccaccagaacagacatc
tgccagggagcgctgggtgactgctggctcttggcagccatcggctctctcaccctgaac
gagaggcttcttcatcgggtcgtcccacatgggcagtccttccaagacgactatgctggt
atcttccacttccagttctggcagtttggggagtgggtggatgttgtcattgatgacaga
ttgcctgtcaaagacacagagctcatgttcgtccattcagctgagggcaacgaattctgg
agtgcacttctggagaaagcttacgctaagctgaatggctcctatgaggctctgtccgga
ggaagcaccactgaagggtttgaggacttcacaggtggtgtgtctgagatgtacgagctg
cgcaagcctcccagaaatctgtacaggataatctacaaagctctggagagaggctccctg
ctgggctgctcgatcgatgtgagtgctaaacacactggcgcaccatcaagacacgaacat
tggtgttgcaccatcttgagaaagccaattagattaaaagcatgtctattcatttctgtg
ccagacaatccttactcagatgaagacgtcatgtttttacagatcaccagcgccttcgac
atggaggctgtaacattcaagaagcttgtgaagggccacgcctactctgtcactgggctg
aaggaggttgatttccgtggcaacatggaacgccttatccgagtacgtaacccttggggc
caggtggagtggactggtgcctggagtgacaatgcacctgaatgggacgagatcgaccct
tctgaacgagaggacttgcatcttaagatggaggacggggagttttggatgtccttcagt
gagttcacgaggcagttctctcggctagagatctgcaacttgactcctgatgttctgagc
gatgacggtctcagccactggaacaccataaagttttatggcacgtggaggagaggcagc
accgctggaggctgcaggaaccatcccaacacgttttggatcaaccctcagtataagatc
acattgctggaggaagatgatgatccagaggacgatgaggtggcttgcagttttttagta
gcgctcatgcagaaggaccgccgcagatatcggcaccacggtcaggacatgcacaccatt
ggctttgctctctatgagatcccagaagagtacagaggctgccagaatgtccacctgaag
aaaaatttctttttgaaccattcatcgtgcgcacgctcagagaccttcattaacctgagg
gaggtgagcacgcgtctgcgtctgccccctggggagtacctcatcgtcccctctaccttt
gagcctgggaaagaggctgactttgtcctcagagtcttcactgagaagcaatcagaaaca
gaagaactggatgatgaaatctctgccaatttagcggacgatgaggaaataactgaagac
gatattgatgactcctttaaatccatgttcgcccagctagcaggagaggatatggagatt
tctattcacgagctcaggaccattctgaacagagtcgtcgcccggcacaaagatctgaag
actgatggcttcagtatggaatcatgtcggaccatggtcaacctgatggacaaagacggt
agtgcccgtttagggctggtggagtttcagatcctctggaacaagatccgaaactggctg
gtcgttttcagacagtttgaccttgacaagtcaggggccatgagctcatatgagatgcgt
cttgctgtggaggcagcaggttttaaactgaataacagactgaaccagatcctggtagcc
cggtatgcagagaatgagatgattgactttgacaacttcatctgctgcttggtcaagctt
gaagccatgtttaggtctttccagcagtttgacaaggaggcatcaggagaggctgagctg
aatctcacagagtggctttacctgacaatgtgtggttga
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integrated database retrieval system
