Seriola dumerili (greater amberjack): 111225166
Help
Entry
111225166 CDS
T05606
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111225166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111225166
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111225166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111225166
NCBI-ProteinID:
XP_022605580
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MFNWVVKVVPQLPEAPGTDEAADSPAAPTTKNREVKSPPLKNTDEVTEDGQGQTGVLGWL
SNGFVSALPQPTSSPRLSRANSDARSGEDGERSGVIGWVTQGLTKVLPQPDEKYRETNDD
NDEEHTEVYDVATMPDYDPLPHIPVVEMMSDDEVSEVECQNPQFPPNMVNWIKQIIPQPV
ILPPGAVPIEPSAKSSRSSLDKLLSPPPESLSGISLDTDSKASGVVGWFVSGLGLKLPQP
AIQPKDDAEGAAEVLQKASSKLKPDMVLEDMESDNEGQQKCEGGSKAEAPSTSLTPPSPA
THQQLEATQQTQSSSLSMASMQSQKCDDASPVPEPSECVTKISQEDAETQTGRWTPFIES
IKKEAEDGALATMEERLLQERMEMARMAEEVARQTAEMAIRQMASEGHSIKLSLGSQELL
DEPEVELPVPEEEEESEEEHSKVTEREESIAVEEQEEEEETEEPATTEPEPKKEAEPQCI
SPSPPPSPESVKSCESEPESEPEPEPETKTQEANSEAEPITRQPQKAEEDGQGTNADKAA
EKEEEATGDGCGAPVSCDAFKSCLMRIPHTSECLGNINAFFKENGISPPKIPSMPKLPTQ
LSDVTKYLPTLPPELRQELSQIRLTQVPRNIAQTLTEILPKSSEGSVGPSLSSLSQSFSN
IPEKLSQFPSRTQQYFLNLRSRSPSPSSPSGSALELPNVPSYPRLPPIVSPPSKQLNSPS
HQLSGLSNPAFFIEDDSDISAIRPAETSSLSLRPAVNVEDVDSDHERKGGAGGGGGGNEE
QSTIPQILTPQDPKLTTLTVPVTPSGGRQSRRLQSQSEDDDEDGSIPVRAWPSQSSLHST
DDILKERPASSASQTSTVVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSVISSPPQAS
APQPAPGAQPVDGGEKEAKAGPSGGGGGGGGGGGEGGVESEAEEEQSSSCCKVKAPRWIR
ACVHYCFPASIDPFTNLMYVLWMFLVSLAWNWNVWFIPVRWAFPYQTPDNIYYWLLTDYL
CDLIYILDITVFQPRLQFVRGGDIVSDKKEMRKNYMKTKRFKFDVASLVPLELFYFKTGI
NPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSALKG
LGSTKWVYNGEGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIG
QMRDVVGAATAGQTYYRTCMDNTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELL
TQLPDKMRLDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGR
EMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANLFIL
DKKDLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEEAKEPRQVPAAPVRQETPRLLRA
ALEMTEKSSRLKGALAKVKEKTNKSTLDLTEMRTRLHPSLPAPPHFTLHPTVTTTAL
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtcccccaactccctgaagctcccgggacagatgaa
gctgccgactcccctgctgctcccactacaaaaaacagagaggtgaagagtcctccactg
aaaaacacagatgaggtcacagaggatggccagggccagactggagtattgggctggctg
tccaatgggttcgtcagcgctctgccacaacctactagctcccctcgcctcagcagggcc
aactctgatgccaggtcaggagaggatggagagaggtctggagtgattggctgggtgact
cagggtctgaccaaggtgctacctcagcctgatgaaaagtacagagagactaacgacgac
aacgatgaagaacacactgaggtctatgatgtagcaacaatgccagattatgatcccctc
ccacacatcccagtggtggagatgatgtcagatgacgaggtgtcggaggtagagtgtcag
aaccctcagttccctcccaacatggtgaactggataaagcagatcatcccccagccagtt
atactgccccctggtgccgtgcccatagaaccatcagccaagtcctcccgctcatctctg
gacaaacttctgtctccaccacctgaatctctcagtggaatctcactggacactgacagc
aaggcctcaggtgtggttggctggttcgtgtcaggactgggcctgaagttgcctcagcct
gccattcaacccaaagatgatgctgagggtgcagctgaagttctacagaaagcttcatcc
aaactcaaacctgacatggtactggaagacatggagtcagacaacgagggtcagcagaaa
tgtgagggtggttccaaagctgaagcaccttccacatcgctgactccaccatcgccggca
acacaccaacagctggaggcaacacagcagacacagtccagttcactgtccatggcatcc
atgcagtcccagaagtgcgatgatgccagtccagtaccagagccatcagagtgtgtgaca
aaaatatctcaggaagatgccgagactcagacaggccgctggacgccgtttattgagagc
atcaagaaggaggctgaagatggagctttggccaccatggaggaacgtctgctgcaggag
cgcatggagatggcacgtatggctgaggaggtggccaggcagacagctgagatggccatt
agacagatggccagtgagggacactccatcaaactctcactagggagtcaagaactgctg
gatgagcctgaagtcgagctgccagtgccagaagaagaagaagagagtgaagaagagcac
agtaaagtcacagaaagggaagagagcattgctgtggaagaacaggaggaagaggaagag
accgaggagcctgccaccacagaaccagagccaaagaaggaagcagagcctcagtgcatc
tccccatctccacctccaagtcctgaatcagttaagtcctgtgagtcggagcctgaatct
gaaccagaaccagaaccagagactaagacccaggaagccaattcagaagctgagcctatc
acccggcagccgcagaaagcagaggaagacggtcaaggcaccaacgctgacaaagctgct
gaaaaagaggaggaagctacaggggatggctgcggtgctccagtcagctgtgatgcgttt
aagagttgcctgatgcgcattcctcacacctctgagtgcctcggcaatatcaacgcattc
ttcaaagagaacggcatctcccccccgaaaataccctccatgcctaagctacccacccaa
ctctctgacgtgaccaagtacttacccaccttaccccctgaattacgccaagagctctcc
cagatcagactcacacaggtcccccgaaacattgcccagactctgactgaaattttgccc
aaaagctcagagggttcagtcggtcccagtctgtccagtctttcccagagcttttcaaac
atcccggagaaactctcccagtttcccagccggacgcagcagtacttcctcaacctccgg
tcccgctccccgtctccatcctcccccagtggtagcgccctcgagttgcccaatgtgcca
tcctatccacgtctgcctccaattgtcagccccccgtcaaagcagctcaactccccgtcc
caccagctgtctggtctctctaacccagcgttcttcattgaagatgactcagacatttca
gcaataagacccgcagagacctccagcctcagccttcgtccggccgtcaatgtagaggac
gttgactcagaccatgagagaaaaggaggagcaggaggaggaggaggagggaatgaggag
cagagtactatcccccaaattctcaccccacaggaccccaaacttacaaccctcaccgtc
cctgtgaccccatctggaggtcgtcagagtagaaggctgcaatctcaaagtgaagatgat
gatgaagatggaagcatccctgtcagagcctggcccagccagtccagcctgcacagcaca
gacgacattcttaaagaacgtccagcatcttcagccagtcagaccagcacagtggtgaac
gagcgtctgcaggagctggtcaggatgtttaaagagaggacagagaaagccaaggagaaa
ctcattgaccctgacagctccgatgaagacagcgtcatctcctctcctcctcaggcctca
gctcctcagcctgctcctggagcgcagccggtggatgggggagagaaggaggcaaaagca
ggtccatcaggaggaggaggaggaggaggaggaggaggaggagaaggcggggtggagagt
gaggcagaggaggagcagtctagcagctgttgcaaggtgaaagctcctcggtggatacga
gcctgtgtacactactgtttccccgccagcatcgaccctttcaccaacctaatgtatgtg
ctgtggatgtttttggtttctcttgcgtggaactggaacgtatggttcatcccggtgcgc
tgggctttcccctatcagactccagacaatatttactactggctgctgactgactacctg
tgtgacctcatttacatcctggacatcaccgtcttccagccacgtctgcagtttgttcgt
ggaggggacatagtgagtgacaaaaaagagatgaggaagaattacatgaaaaccaaacgc
ttcaaatttgatgtagccagccttgttcccttggagctcttctattttaaaaccggcatc
aaccccctgctccgcttacccaggctgctgaagatcaactccttcttcgagttcaacgag
cgtctagaggccatcttgaccaaagcctacatctacagggtgatccgtaccaccacctat
cttctttattgtctccactgtaatgcctgtctctactactggggctctgccttaaaagga
ctgggatctaccaaatgggtgtacaatggcgagggaaacagctacattcgctgttactac
tttgcggtgaagaccctgatcaccattggaggtctgccagaccccaccaccctgtttgag
attgtcttccaactcatcaactactttgttggagtctttgccttctctatcatgattgga
cagatgcgtgatgtggttggtgcagccacagcaggtcagacctactaccgcacatgtatg
gacaacactattaaatacatgtcctcatatcgcatccccaaagacgtccagaaccgcgtc
aaaacctggtacaactacacttggcaatctcaaggcatgctggatgagcaggagctgctg
actcagttgccagataaaatgcgtctggacattgctatagacgtcaactactccatcgtg
agcaaagtccctctatttcagggttgtgaccgacagatgatctttgatatgctgaaaagc
ctgcgctctgttgtctacctgccaggggattatgtctgcaaaaagggcgaggtgggtcgg
gagatgtacatcataaaggcaggggaagtgcaggtggttggaggtcccgatgggaagacg
gtctttgtcactctcagagcaggatcagtctttggagagatcagtttgcttgcagtaggc
gggggtaataggcgcacagccaatgtgattgctcatggttttgccaatctcttcatcctg
gacaagaaagacctgaatgagatcctggtccactaccctgagtccaagaaactgctccgc
aagaaggccaggaagatgcttaccaaggggaagaaacctgagcccaaagaagaggctaag
gaaccccgtcaggtaccggcagccccggtcaggcaggagactcccagactgctgagagct
gccctggaaatgacagagaagtcctctagacttaaaggagctctggctaaagtcaaagag
aagaccaacaagtccactctggacctgacagagatgcggacacgccttcacccgtctctg
ccagctccaccacatttcactctgcatcccactgtcacaacaacagctctgtga
DBGET
integrated database retrieval system
