Seriola dumerili (greater amberjack): 111225199
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Entry
111225199 CDS
T05606
Symbol
cngb1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111225199 (cngb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111225199 (cngb1)
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111225199 (cngb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
111225199
NCBI-ProteinID:
XP_022605653
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MLTWISGALPQPLSPKLSRANSTTQEENTTASKPEDEKGMIAWLTQGLEKVVPHPQAELK
SKESPPAEPPAEVQQPAAPPAPEPQVVTVVQVAPEPDRGQDKDQDQNQEDKTDNKPFPPR
MMDWIKQGIEKVVPQPEIQVRPKTDDNEKSDTPASTKAAAPPAAPAATKPAADPEKSSKE
AEQQPNVVGWIVTEFSRMLPQPVPKDAASDELQSISITQKKTDLVLEDIEQDGDKDTEQH
KKETEDATIQMEQVTPLMERLQQDRLEAARVAEEMAMKAAEEAVRQLEVEHSAKIVIETL
PESNEQLPNILEEENEDDPELQNLQEDSDDSTDNTSPVGNKVAVENIEEDKKPDEADFKR
SLLDVCPAADDAEAKTQPTESEPAEEVTPSSTDVEPASERRDLESPVTQQPEAPGAPTIT
TDQDDEAAEDDGCGGSCGRSLGEAPLLKVQDVDPGRGRNIPQIITTPELESMILTVPDME
LSKLSQAAEDLKAWSSQGDLLTADEETRPLSAASVGSVVIQDRLSELVRLFKGRTERQRD
RLVDPDESEGESPSASPTKAPPPPPPPPPPGEEKKEEAPAEAEEEEEEEKLGFSFELLGH
PVKLPKLPKLPLMPDWLRAIVEYRFPSSIDPFTDLIYVIWLFFVVAAWNWNVWLIPVRWA
FPYQTPENIHLWLLADYTCDFIYITDILIFQPRLQFVRGGDIVCDKKDMRENYMTTERFK
MDIISLFPMEIFYFFTGVNSLLRFPRLLKYMVFFEFNDRMEAVMKKAYIYRVIRTSTYLL
YSLHINACLFYWGSDYEGLGSTKWVYNGRGNAYIRCYYFAVKTLITIGGLPDPTTVFEIC
FQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDSTAKYMNSYNIPQEVQNRIKT
WYDYTWKSQGMLDEQELLVQLPAKMRLDIAVDVNYAIVSKVALFQGCDRQMVFDMLTRLK
SVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGG
NRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKKAKKMLTKDKKPDEKEGGKEV
EVIPPRPDTPEMFKAALKVTEQAGLEGTFAKLKKTYKPSESTGEAPSSISPLPPPSPMHR
RSPIPRAPVQDDDDTVAETADSSVIIRMTPRHQGEEVLSVEVVPGEGREEQH
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtggatcagcggagctctgcctcaacctctctcacctaaactgagccgggcc
aactccaccacccaggaggagaatacaacagccagtaaacctgaagacgagaaagggatg
atcgcttggctcactcagggtttggagaaagtagttcctcatcctcaggctgagctgaag
agtaaagagtcaccaccagctgagccgcccgctgaggtgcagcagccagccgctccacca
gcaccagagcctcaggtggtcactgtggtccaggtggcaccagaaccagaccggggccaa
gacaaagaccaagaccaaaaccaagaggacaaaactgacaacaagcctttcccacccagg
atgatggactggataaaacagggaatagagaaggtggttcctcagccagagatccaggtc
cgtccaaagacagacgacaacgagaagagtgacactcccgcttccactaaagctgcagct
ccacctgcagcaccagcagctactaaaccagccgccgaccctgagaagtcttctaaagaa
gcagagcagcagcccaatgttgtgggctggatcgtcactgagttcagtcgcatgttacct
cagcctgtaccaaaggacgcagccagtgatgagttgcagagcatcagcatcacacagaag
aagacagacctggtcctggaggacatcgaacaggacggggacaaggacacagagcagcac
aagaaggagacagaagatgcaacgatccagatggagcaagtgactccactgatggaaaga
ctgcagcaggaccgtctggaggcagcccgtgtcgcagaggagatggctatgaaggcagcg
gaggaggcagtccgccagctggaggtcgagcattcagcaaagatcgtcatagaaacactg
ccagagtccaatgagcaactgcccaacatcctggaggaggagaacgaggacgacccagag
ttgcagaacctgcaggaggacagtgacgacagcacagacaatacaagtcctgtgggaaat
aaagtagcggtggaaaatattgaggaagacaaaaaacctgacgaggccgacttcaaaagg
tctctactggacgtctgtccggctgcagatgatgctgaggccaagactcaacccactgaa
tctgaaccagcagaggaagtcactccatcatcaacagatgtggagccagcatcggagagg
agagacctggagagtccggtcacccaacaaccagaagctccaggggccccgaccatcacc
acagaccaggatgatgaagcagcagaggacgatggatgtggagggagctgtgggcggagt
ctgggtgaagctccgctgctgaaggtgcaggacgtggatccgggaagaggccggaacatc
ccccaaattatcacaaccccagaactggagtccatgattctgactgtccctgacatggag
ctgtcgaaactcagtcaagcggctgaggatctgaaggcctggtccagtcagggagacctg
ctgactgcagatgaagagacacgtcctctgtcagccgccagcgtcggtagcgtcgtgatc
caggaccgtctgagtgagctcgtcaggctgtttaaaggtcgaacagagcggcagagagac
cggctggtggacccagatgagtctgaaggggagagtccctcagcctctccaaccaaagct
ccacctccccctcctcccccacctccaccaggggaggagaagaaggaagaggctcctgct
gaagcagaagaagaagaagaagaagaaaagttggggttcagctttgaacttttaggacac
cccgtgaaacttcccaaactgcccaaacttcccctgatgcccgactggctccgagccatc
gtggagtatcgcttcccctccagcatcgaccccttcactgacctgatctacgtgatctgg
ctgttcttcgtggtggcggcctggaactggaacgtgtggctgatcccggtccgctgggcg
ttcccctaccagacccccgagaacatccacctgtggctgctggccgactacacctgcgac
ttcatctacatcacagacatcctgatcttccagcccagactgcagttcgtccgcggagga
gacatcgtgtgtgataagaaggacatgagagagaactacatgaccacagagaggtttaag
atggacatcatcagtctgtttcccatggagatattttacttcttcaccggagtgaactct
ctgctgaggttccctcggctgctgaagtacatggttttctttgagttcaacgacaggatg
gaggctgtgatgaagaaagcctacatctacagggtgatccggacctccacctacctgctg
tactctctgcacatcaacgcctgtctcttctactggggctcagactacgaaggactggga
tccaccaaatgggtctacaacgggagaggcaacgcttacattcgttgttattactttgcc
gtgaagacgctgatcaccatcggaggtctgccggaccccaccaccgtctttgagatctgc
ttccagctcatcaactatttcgttggtgtctttgcgttttccatcatgatcggtcagatg
agagacgtggtcggagcagcgacagccggagagaactactaccgtgcctgcatggacagc
accgccaagtacatgaactcctataacatcccccaagaagtccagaaccgcatcaagacc
tggtacgactacacctggaagagccagggcatgctggatgaacaagagctgctggtgcaa
cttcctgccaagatgagactggacatcgctgtggacgtcaactacgccatcgtcagtaaa
gtcgccctgttccagggctgtgacagacagatggtgttcgacatgctgacgaggctcaag
tccgtcgtctacctgcccggagacttcgtctgcaagaagggggagatcggcagggagatg
tacatcatcaaacagggggaggtgcaggtggtgggcggtcctgacctgcagacggtgttt
gtcaccatcagagccggctcggtgtttggagagatcagcttgttggcaggaggtggaggc
aaccgacgtactgccaacgtgaaggcgcacggattcgccaacctcttcatcctggacaag
aaggacctggcagagatcctggtccactacccagagtcccagaaactgctccgcaagaag
gcgaagaagatgctgacgaaggacaagaagccggatgagaaggagggaggtaaagaggtg
gaggtcatcccccccagaccggacacccccgagatgttcaaggcagcgctgaaggtgacg
gagcaggcgggactggagggaacctttgccaaactgaagaagacctacaaaccgtctgag
agcacaggagaggctccctcctccatctctccgctcccccctccctcgccgatgcaccgc
cgctctccgattcctcgcgctccggttcaggacgacgacgacacggtggcggagacggcc
gacagctccgtcatcatcaggatgacgccgcgacatcaaggggaggaggtgcttagtgtg
gaggtggtgccgggggagggacgggaggagcagcactga
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integrated database retrieval system
