Seriola dumerili (greater amberjack): 111239088
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Entry
111239088 CDS
T05606
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111239088
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111239088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
111239088
NCBI-ProteinID:
XP_022624582
LinkDB
All DBs
Position
Unknown
AA seq
2273 aa
AA seq
DB search
MEQSHKVSLKFVSPLQITADSMAKNRNTSLLESELYYLISRFLTTGPCRRAAEVLASELE
EYQLLPRRLDWLGNEHPRTYEDVVAANRHIAPDHLLQICKQIGPLLDKEVPSCVPGVHSL
LGSGKQSMLRTPKDCDSVRFKASSYAALHRGRPPERPLNCKNPPPLVKVHRGRELTGAQR
FSSINPVSNYEHMRLHRRILGHLSAVYCIAFDRSGLRIFTGSDDCLVKIWSSFDGRLHST
LRGHSAEITDLAVNYENTLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFAK
GSKRYMLSTGTDATVCFWQWDVNNINFSDRPHKFTERPRPGVQTVCSSFSPGGMFLATGS
TDDVIRIYYLGCGSPEKISELHEHTDKVDSIQFCHSGERFVSGSRDGTARIWKLHQRQQW
RCILLNMSATLPGAEAMSEEESYFKPKVTMVAWDRHDNTVITAVNNHLLKVWNSYTGQLL
HILKGHEAEVFVLEPHPFDPRIILSAGHDGNVFIWDLLRGTNTQHYFNMIEGQGHGAVFD
CKFTPDGQRFACTDSHGHLLIFGFGSSKPYEKLPDQVFFHTDYRPLIRDANGFVLDEQTQ
QAPHLMPPPFLVDVDGNPHPPRYQRLVPGRENIAAEHLVPQLGYVATSDGEVVEQVISQQ
TAEHEEVAIRRSSLLDEAIRQLREQQDRQSQPGREAVLGAVAGPEGQVEAQGPALAPAPS
TPRRVSVNDRADVQSPPNVGLRRSGQVEGVRQMHQNAPRSQMATERDLQAWRRRVVVPEL
APSNYRDQEDIRTAKGDEEVALYNAKKRRIIYSSCRDDSDDEPPTTKRAHGRSDTVDFID
FSCEEGEETASSEGHSEDNDLDGSELESSNDEEEWNSDSSSHTSSEYSDWTADAGINLQP
STPLSSRKRVQRRLSTSEEEEEEHDDEEEKQQSDEEEKPEKKSKEKAKKAKNKAPRRPKA
RPSINREVSNEFRPSPWITDVIPRKSPFVPQMGDEVIYFRQGHEAYVEAVSRSELYHINL
DKQPWKKMELRDQEFVKITGIKYEVCPPTLCCLKLTLIDHGTGKISDKSFSVKYHDMPDV
IDFLVLRQSYDEALRRNWQPNDRFRSVIDDAWWFGTIVCQEPYQPEYPDSLFQCFKVRWD
NGETEKLSPWDVEPIPDNAQQPETEGGGIPVTADEMSELMYKPLQGEWGERSRDEECERI
IAGIDQLITVEIAAPFSGPVDLIQYPTYCTVIAYPTDLGTIRLRLMHRFYRRLSALIWDA
RYIAHNARTFNEPRSKIAHSAKIITNVLQKFVNNPSCTDIMEIYNAVEEMDDDEEVSDTE
APGTSAGHRLRQRSVEVLPDRDAWKEQCKNLLNYIFECEDSEPFRQPVDPENYPDYHVII
DTPMDFGTVKRTLEEDHYENPVELCKDTRLIFANAKAYTPNKRSKIYSMTLRLSAFFEEQ
IRTIISEYKTAVKSSDRLRRSQRFRKKMQQQDQSTATTSQKRAAVKTQEKVESTSVTKST
SAKVSVPERARRSRSSSSGHSSSEDDSGSKAASSTPESDSESESEEEKRPGSSRHHQRRH
KARVTRSNCAKQRKKVAESDSEEEEDDDEEEEEEFDSEGEEGEDGEVSSQSSGRRYPSRS
KNSRSTRLTRNSAAADRKRTEGRAEMNGHSSRSSRRERRHHQDSDRATSQGSDREEEEIT
VRRSLKRKTARAAVNKIKLLDVSDEEDDEEEEKPRRSSSRLRHTARASKRTAVIQSSSDS
DGERSTRASRNTKKSGRESKDEEAGNESDASSSSQNQQNGNTRSSKQRTSKQAAKTKGND
NLSHVNGHSAKHHKSDSNSEQEETAEESSGEAEEEEEKQVAVSRKPSRSTGSTPARKKRI
TSEEEEEEIEDTERRTTRHKPPVSSDEEDKDHSSQKHPHQNGKNMEEAIHKDSKKKSKVS
PSKNQDKQKSASTNKLDGAESDELSDSPKRSSPRKKRLKKDVEHEEESNHSSEEFEVETK
TKRSTRNKSKSKRPHGDTSASESSEQEYRPKRKSKRKRSTGSSDEESDNSDNTSNRRLSL
RALPKKKYISDNSFSEEDSASVGQGKQRNGRCNKRESNRTSPSETRNQSSKRKRIYTSDS
EDVEEDREKEPVSKNNKNSRSGSSKRPKRESKQGDGNSNEEDTYSQSDSSEEEEEEDVRR
SKSGKKNLRQPKHKRKESYSSSNHSSDSESEQSSSASENSFASSGSHSSPKRRSHRQSGT
GERTASRQLRQRRQRAASGEEEDSDESYSKSQRKTRVNTRNRGKRTVNYHDSE
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaagtcataaagttagcctaaaatttgtttctcctctccaaatcacggccgat
tcaatggccaaaaatcggaacacttcgctccttgagtcggagctctattacttgatttct
cgttttctaacaacgggtccatgtcggagagcggctgaggtcctggcgagcgaattagag
gaatatcagcttttgcccaggagactggactggttgggaaacgagcacccgagaacatat
gaagatgtggttgcagccaacagacacattgcaccagaccatttgctgcagatatgtaag
cagattggaccacttcttgacaaagaggtgccatcatgtgtcccaggagtacactctctc
ctggggtccggaaagcagtcaatgcttaggaccccaaaagactgtgacagtgtgcggttt
aaagcttcatcatatgcagcccttcacaggggcagaccaccagagaggcctttgaactgc
aagaatcctccacccttagtgaaggtgcatcgcgggagagagctgacgggagcgcagcgc
ttcagctccatcaatcctgtcagcaactatgagcatatgcgactgcataggcggatcctg
gggcatctgtctgcagtgtactgtatcgcatttgatcgctccggtctcaggatcttcaca
ggctcggatgactgtttggtgaagatttggtcttcgtttgatggaaggcttcattcgacg
ttgcgaggacactctgcagaaatcacagacttggcggttaattatgagaacacattaatt
gccgcgggaagctgtgacaagaccatccgtgtatggtgccttcgtacctgtgctcctgtg
gctgtgctgcaggggcacagtggatccattacctcccttcagttctcaccgtttgccaag
ggctcaaaacgttacatgctgtccactggaactgatgctactgtctgcttctggcagtgg
gatgtcaacaacatcaactttagtgatcggccacacaaatttacagagcggccaaggcca
ggagttcagactgtgtgctcctcattcagtccaggtgggatgttcttagcaacaggaagt
actgatgatgtcatcagaatatattacctgggatgcggaagtccagaaaagatatcagag
ctccatgagcacacagacaaagttgatagcatccagttttgccactcaggtgaaaggttt
gtgagtggaagtcgtgatggaacagcgcggatctggaagctccatcagcggcagcagtgg
aggtgcatcttgctcaacatgtctgccactcttccaggtgctgaagcaatgagtgaagag
gaaagctacttcaaacccaaagtcaccatggtagcgtgggatcgccatgacaatacagtc
atcacggctgttaacaaccatctcctcaaagtgtggaactcctacacaggacagctgcta
catatccttaaaggccatgaggctgaggtgtttgtgctggaaccacacccttttgacccc
aggatcatcctatctgctggccatgatgggaatgtcttcatatgggatctgctgcgagga
acaaacacacagcactacttcaacatgatcgagggccagggtcacggagccgtgttcgac
tgcaaatttactcccgatggccagcgtttcgcctgcacagactctcacggccatctgctc
atctttggcttcggcagttccaagccatatgagaagcttccagaccaggtgttcttccac
acagactataggccgttgatccgagacgccaacggctttgtgctggatgaacagacacaa
caggcaccccatctcatgccccctcccttcttggtggacgtagatggaaacccccatcca
ccgaggtaccagcgtcttgtcccagggcgggagaacattgcggctgaacacctggttcct
cagctgggatacgtagccaccagtgatggcgaggtggtggagcaggtgatcagccagcag
actgctgagcatgaggaggttgcgataagacgcagcagccttctggacgaagccatccga
cagctccgggagcaacaggaccggcagagccagcctgggagagaggcagttctgggtgct
gtagcaggaccagaggggcaagttgaggcacagggcccagccttggcaccagcaccaagc
acaccacgcagagtgtctgtgaatgatcgagcagatgtgcagtcaccccccaatgtgggt
ctgcgccgcagtggacaggtggagggtgtccggcagatgcaccagaatgctcctcgcagc
cagatggccacagagagagacctgcaggcctggagacgcagggtggtggtgcctgaactg
gcacccagcaactacagggaccaggaggacatccgaacagccaaaggagatgaggaggtg
gctctgtacaatgcaaagaagaggcgcattatctacagtagctgtcgagatgattcagat
gatgagcctcccactacgaagcgagcacatggccgcagtgacacagtggatttcatcgac
ttctcatgtgaagagggagaggagactgcaagctcagagggacactctgaggacaatgac
ttggatgggagtgaattggagtcatccaatgatgaggaggagtggaacagtgacagctca
agccacacgtccagcgagtactcagactggacggccgatgctggtatcaacctgcagccc
tctaccccattgtcatcacggaaacgagtgcagcgcagactcagcacttccgaggaggag
gaggaagagcatgatgatgaggaggagaagcagcagagtgacgaggaggaaaaacctgag
aagaaaagcaaagagaaggcaaagaaagcaaagaacaaggcaccccggcgtccaaaggcc
agaccatccatcaacagagaagtgtccaatgagttcagaccctctccatggatcactgat
gtcattcccaggaagtctccttttgttccccaaatgggtgacgaggtcatctattttcgg
cagggacatgaagcctacgttgaggctgtgagccggagtgaactgtaccacatcaactta
gacaaacagccctggaagaaaatggagctgcgggaccaagagtttgtgaagatcactggg
atcaaatatgaagtctgccctccaacactttgctgtctgaagctgacccttattgaccac
ggcactggcaaaatctcagacaagtcgttttctgtcaagtatcatgacatgccagatgtt
atagatttcctggttttgaggcaaagttatgacgaggcactccgtagaaactggcaacca
aacgacaggtttcgctcagtgatagacgatgcctggtggtttgggaccatcgtctgtcag
gagccctaccaaccagagtatcctgacagtctcttccagtgtttcaaagtcagatgggac
aatggggaaactgagaaactgagtccttgggatgtggaacctattccagataatgcccag
cagccagagacagaaggaggtggtatccctgtgacagcagatgagatgagcgagctgatg
tacaaacctctgcaaggagagtggggggagaggagcagggacgaggagtgtgaacgcatc
atcgctggcatcgaccagctcatcactgtcgagattgcagctcccttctctggtcctgtg
gacttgatccagtatcccacctactgcactgtaatcgcctatcctactgatttgggaacc
atcagactgcgactcatgcacagattctacagacgcctctcagcattaatttgggatgcc
aggtatattgcacataatgcccgcactttcaatgagccaaggagcaagattgcccactct
gcaaaaatcatcacaaatgtcctccagaagtttgtcaataatccaagctgcacagatatc
atggagatttacaatgctgtggaagagatggatgatgatgaagaggtaagtgacacagaa
gcaccaggaacctcagccggacaccggttacgtcagcgctctgtagaggtgctgccagac
agagatgcctggaaggaacagtgcaagaatctgctcaactacatatttgagtgtgaggac
tcagagccattcagacagcctgtggatcccgagaactatccagactaccatgtcattatt
gatacaccaatggactttggcacagtgaaaaggaccttggaagaagaccactatgaaaac
cctgtagagctttgcaaagacacccgcctaatatttgccaatgctaaagcctacacaccc
aataaacgctccaagatttacagtatgaccttgcgcctctctgccttctttgaggagcaa
atcagaacaatcatatccgagtacaaaactgccgttaagagcagtgataggctccgccgc
agtcagcggttccgcaagaaaatgcagcaacaggatcagtccaccgccacaacaagtcaa
aagagggctgcagtcaaaactcaggaaaaagtggagtcgacgtcagtgaccaaatctacc
tcagccaaagtgtctgttcctgagagagccaggaggagtcgaagcagcagctcaggtcac
agctcctccgaggacgactccggctccaaagctgcttcgtcaacaccagaatctgacagt
gagagcgagtcagaggaggaaaaacgtcctggttcctcaaggcaccaccaacgcagacac
aaagcaagagttacaagaagcaattgtgccaagcagaggaaaaaagttgcagagagcgat
agtgaagaggaagaagacgacgatgaagaagaggaggaggagtttgacagtgaaggtgaa
gagggtgaggatggagaagtttcctcccagtcttcaggtcgtcgctaccccagcaggagt
aaaaacagcaggagtacacggctgaccagaaacagtgctgccgcagacaggaaacggaca
gagggcagagcagagatgaacggtcacagcagtaggtcatctcgcagggagagacgtcac
caccaggactctgacagagccacgtcccagggctcggacagggaggaagaggaaatcacg
gtccgcagatcactcaagaggaagacggcgagagcagctgtgaataagatcaaactcctg
gatgtgtcggatgaagaagacgatgaagaggaggagaagccaaggaggagcagcagccgc
ctccgccatacagcccgtgccagcaaacgcactgcagtgatccagagcagctcagattca
gacggagagcggtcaacacgggcttctcggaatacaaaaaaatcaggtcgtgaatccaag
gatgaggaggctggaaatgaaagcgatgcttcatcctcctcccagaatcaacagaatggc
aacacgaggtccagtaaacagaggacatcaaaacaagctgctaaaacaaagggaaatgat
aatttgtcccatgtaaacggacacagtgcaaaacatcacaagtctgacagcaactctgag
caggaggaaactgcagaggagagttccggagaagctgaagaggaggaggagaaacaggtg
gccgtgtctcggaaaccttctagaagcacaggaagcactccagccaggaaaaagaggatt
acaagtgaggaggaagaggaggagatagaggacactgaacgcaggaccacacgacacaaa
cctcctgtaagctcagatgaagaggacaaagaccacagttcccagaaacacccacaccaa
aatggaaaaaacatggaggaagcaatccacaaggactctaagaaaaaaagtaaagtttcg
ccatcaaaaaaccaagataaacaaaaatctgcctcaactaataaactggatggtgcagaa
tcagatgaactcagtgattctccaaagagatccagcccacgcaagaaaagactgaaaaaa
gacgtagaacatgaagaagaaagtaatcactccagtgaagaatttgaagttgaaacaaag
acaaagaggtcaacacgaaacaagagcaaatctaaacggcctcatggcgacacctcagcc
tcagagagttctgagcaggaatacagacccaagaggaagtcgaaaaggaaacgctccact
ggctcatcagatgaagagtcggataattcagataacacatcaaatagacggctgagtctc
cgggccctaccaaaaaagaaatacatcagtgacaactctttttctgaggaagattctgct
tctgtgggccagggtaaacagaggaacggcaggtgtaataagagagagtctaacaggacc
tctcccagtgaaaccaggaatcagtcttccaagagaaaacgtatttacacttcagactct
gaagatgtggaggaggacagagagaaggagccagtgtccaagaacaataaaaatagcagg
tcaggctcatcaaagcgtcccaaaagggaatccaaacaaggggatggcaacagcaatgaa
gaggacacctactcccagtctgattccagcgaggaggaggaggaggaagatgtccgtcgt
tcgaagagcgggaaaaagaacttgaggcagccaaaacacaaacgaaaggaaagctacagc
agcagcaaccacagttctgactcagaaagcgagcagtcatcttcagcctctgaaaactca
tttgccagctcagggtcccacagcagtccaaagaggagaagtcacagacagtctgggact
ggagaaaggactgccagccgccaactaaggcagcgccggcaacgtgctgcctcaggggag
gaggaggacagtgacgagtcatatagcaaatcgcagcgaaagacacgcgtgaacacccgg
aaccgggggaagcggacggtaaattatcacgacagtgaatga
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integrated database retrieval system
