Seriola dumerili (greater amberjack): 111239425
Help
Entry
111239425 CDS
T05606
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu02010
ABC transporters
sdu04145
Phagosome
sdu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111239425
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111239425
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111239425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111239425
Enzymes [BR:
sdu01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
111239425
Transporters [BR:
sdu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
111239425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_21
AAA_29
AAA_16
RsgA_GTPase
AAA_15
AAA_30
Rad17
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
111239425
NCBI-ProteinID:
XP_022625025
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MAENKFILHKVAALILAVCVDLSLFYASGLVVTHGVFGHLVRLWVSAALRCVALTAVCLL
TIGHFRPLLVRIIAAHSLLPAVFETGTKALYHEESQCGQLAGMRCWLLCTAASLAAALFW
EITIPDTDEAAAGKETKQKARDLFMRVLRLFRPDYPLLLGGFVFLSLAVLCEMFIPFYTG
RVIDILGGQFQQSEFISALLFMGLYSLGSSVSAGCRGGLLLCAISSYTCRMKVKLFEALT
KQEIGFFETIKTGEITSRLSKDTTLMGRTVCLNVNVLLRTFIKTVGMISLMMNLSWKLTF
LVLMETPITGLIQNIYDTHYQRLSLAMQGSLALANDAASEVVSSIRVVRSFNTEKHEARR
YDDRLMDTHALKTRRDIVSAVYLLARRLTGLGMQVFMLYYGRLFIRSGQMTTGNLVSFIL
YQSNVGDNIRTLTYIFGDMLNSVGAAGKVFEYLDRKPQVSTEGKLQPDQLRGCVTFHRLN
FAYPANPNKTVLKDFSLELKPGQMTALVGPSGEGKSTCVSLLQRFYEPQDGRILLDNEPL
KSYDHRYLHKKVAVVSQDPVLFSGSIRDNIAYGLADCSLDEIQEAARKANAHDFIKQLEK
GYDTEVGEGGGQLSKSEKQRIAVARALVRQPSVLILDEITSSLDTESENKVQQALASCPN
QTLLVIAHRLKTIERADQIVVISGGKVEERGTHRELMDMKGSYYKLVEKRFTEGNSPQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaataaattcatcctccacaaagtcgctgctttgattttagcagtttgcgtc
gacctgtccttgttttacgcatcgggactggtagtgacgcacggcgtctttggacatctt
gtccgtctctgggtttctgcggctctccggtgtgtggcactaactgctgtatgtctgctc
acaatcggacacttcaggccgttgctggttcgtattatagctgcgcacagtctgctcccc
gcggtgtttgagaccgggaccaaggcgctctaccatgaggagagccagtgcggccagctg
gcgggtatgcgctgctggctgctgtgcaccgcagcgtcgctggctgccgcactgttttgg
gagatcaccatcccggacaccgacgaagcggccgccggtaaagagacaaagcagaaggct
agagatctgtttatgagagtcctccggctgttcagacccgactatcccctgctgctggga
gggtttgtgttcttgtccctggctgttctctgtgagatgttcatcccgttctacactggc
agagtcattgacatcttgggtggtcagttccagcagagtgaatttatatctgcactgctc
ttcatgggcctgtactctctgggaagctctgtgagtgcaggctgcagagggggtctttta
ctttgtgccatcagttcctacacatgcagaatgaaagtcaaactattcgaggctttgacc
aaacaggaaattggattctttgagaccataaagacaggtgaaatcacatccaggttgtct
aaggacaccaccctgatgggaagaacagtgtgcctgaatgtcaacgtgctgctgaggaca
ttcatcaagacggtgggtatgatctccctgatgatgaatctgtcatggaagctgacattc
ctcgtactgatggagacaccaatcactggcctcattcagaacatctacgacacacactac
cagaggttgtccctggcgatgcagggctcactggctttagcaaatgatgcagcaagcgag
gtggtatccagtattcgtgtggtacggagctttaacacagaaaaacatgaggcccgtcgc
tatgacgaccgcttgatggacacacatgccctcaagactcgccgggacatagtctcggct
gtttacctgctggcacggaggttgacagggttgggcatgcaggtcttcatgttgtactat
ggcaggctgttcatccggagtggacagatgaccacgggcaatcttgtttccttcatcctc
taccagtcaaacgttggagacaacataaggacgctcacctacatcttcggtgacatgctg
aactcggtgggggctgctgggaaagtgtttgagtacctggaccggaaaccacaagtcagc
acagaggggaagctccaacctgatcagctgagaggatgcgtcaccttccaccgtctcaac
tttgcctatcctgcgaaccccaacaaaacagtgctgaaggatttctctttggagctgaag
ccgggtcagatgacggcgctggtgggtccgtctggagaaggaaaaagcacctgtgtgagt
ctgctgcagcgattctacgagccgcaggatggacgaatcctattggacaatgaaccactg
aagtcctatgaccaccgttacctccacaagaaggtcgcagtggtgagccaggatcccgtt
ctcttctctggctccatcagagacaacatcgcctacgggcttgctgactgctccttggat
gagatccaggaggcggcacgcaaagccaacgcccatgacttcatcaagcagctggagaaa
ggctacgatacggaggtgggtgagggaggcggccagttatccaagagcgagaagcagcgg
atcgccgttgctcgagctctggtcagacagccgagcgtcctcatcctggacgaaataacc
agctctctggacactgagagtgaaaacaaggtccagcaggcgctggccagttgtcccaac
cagacccttctggtgatcgcccacaggctgaagaccatagagagggcggatcagatcgtt
gtgatcagtggtggcaaagttgaggagcgagggactcaccgggagctgatggacatgaag
gggagctactacaaactggtagagaagcgcttcactgagggaaactcgccgcagtga
DBGET
integrated database retrieval system
