Sulfitobacter dubius: R1T39_05415
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Entry
R1T39_05415 CDS
T09506
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00280
Valine, leucine and isoleucine degradation
sdub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R1T39_05415
Enzymes [BR:
sdub01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
R1T39_05415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
GARS_A
DUF3182
DUF1611_N
DUF2118
ATP-grasp_4
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-ProteinID:
WOI30143
LinkDB
All DBs
Position
complement(1071484..1073430)
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AA seq
648 aa
AA seq
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MFDTILIANRGEIACRVMETAQAMGVRCVAVYSDADAAAKHVQMADAAVHIGGSAPSESY
LKGDVIIQAALDSGAQAIHPGYGFLSENPDFVEAVEAAGLTFIGPSAKAIRAMGLKDAAK
ELMVEAGVPVVPGYHGADQDDALLAEEAGKIGYPVLIKAVAGGGGKGMRLVEDAKEFQAA
LSSARSEAKTAFGNSDVLVEKFVTKPRHIEVQVFGDGTNAVHLFERDCSLQRRHQKVIEE
APAPGMTEEMRTAMGDAAVRAAEAIGYAGAGTVEFIVDGSGGLSADGFFFMEMNTRLQVE
HPVTELITGVDLVEWQLRVAAGEALPKAQDALTINGHAFEARLYAEDVPKGFLPATGTLT
HLHFTPQTRADSGVRAGDTISPFYDPMIAKVIVHGPTRDVALSRLRAALAGCEVGGTVTN
LAFLGALAGHEGFAQGDVDTGLIARDIDALTAQPEVPARHFARAGMAALGVDQPQAEAGF
NLWRPLRRQVTLARDGEEHLLKVRVLSEDVQLWNVGDSEVRAERIGGRWKVDGHVAPTVS
VADNVVTVFDAYGIVFDVVDPLARAAGAHGDGNIVEAPMPGLVRAIDAEVGQSVTKGDRL
AVLEAMKMEHSLLAARDGVVAEVLAQPGDQVEAGAALVRLEAEAEDAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacacgatcctgattgcgaaccggggtgagattgcttgccgggtaatggaaacg
gcgcaggccatgggggtgcgctgtgttgcggtgtattccgatgcggacgcggcggcgaaa
catgtgcagatggcggatgcggctgtgcatattggcggctcggcaccgtcggagagttac
ctcaagggcgatgtgatcattcaggcggcgctcgacagtggcgcgcaggcgatccatccg
ggctatggctttctgagtgagaaccccgatttcgtggaggcggttgaggcggcgggactt
accttcatcgggccttccgccaaggcgatccgggccatggggctgaaagatgccgccaag
gaactgatggtcgaggcgggcgtgcccgtcgtaccgggctatcacggggcggatcaggat
gacgcattgctggccgaagaagccggaaagattggttatccggtgctgatcaaggccgtc
gcaggcggtggcggcaaggggatgcggctggtcgaagatgcgaaggaatttcaagcggcg
ctcagttcggcccggtctgaggccaagacggcctttggcaactctgacgtgctggtcgag
aaatttgtcaccaaaccgcgccatatcgaagtgcaggtctttggcgatggcacgaacgcg
gtgcatttgtttgagcgtgattgctcgctgcagcgacgccatcaaaaggtaatcgaagag
gcccccgcgccgggcatgaccgaagagatgcgcacagcgatgggcgatgctgcggtacgc
gcggccgaggcgatcggctatgccggagcggggacggtggaatttatcgtcgatggatca
ggcggtctgtcggcggacgggttctttttcatggagatgaacacgcgtttgcaggtagag
cacccagtcactgaactcatcacgggcgttgatctggtcgaatggcagttgcgtgtcgcc
gcgggtgaggcactgcctaaggcgcaggacgcgctgacgatcaacggtcatgcttttgag
gcgcggctctatgcagaggatgtgccgaaagggttcttgcctgcaaccggcacgctgacg
catctacacttcaccccccagacccgcgccgacagcggcgtgcgggcgggcgatacgatc
agccctttctatgacccgatgattgccaaggtcatcgtccatggaccgacccgcgatgtg
gcgctctctcgtctccgggcggcgttggcgggttgcgaagttggcggcacggtgacgaac
cttgcgttcctcggtgcgctggcgggccacgaagggtttgcgcagggtgatgtcgatacc
gggttgattgcgcgcgacattgatgcgctcaccgctcagcctgaagtgccggcgcggcat
ttcgcgcgggcgggaatggcggcgcttggggtggatcaaccgcaggccgaagcggggttt
aacctttggcggcccttgcgacggcaagtcaccttggcgcgtgacggtgaggaacatctg
ctgaaggtcagggtactgtcggaagacgtgcaactttggaatgtcggtgacagcgaggta
cgcgctgagcggattggcgggcgttggaaggttgacggccatgtcgcgccgacagtctcg
gtcgcggataatgtggtcacggtgtttgatgcctacggcattgtctttgacgtggtcgac
ccgctggcacgggctgctggtgcgcacggcgatggcaatatcgtcgaggcaccgatgccc
ggtctggtgcgtgcgattgatgccgaagtcggccaaagcgtgaccaaaggcgatcggctt
gcggtgctggaagcaatgaagatggagcattcgctgctggccgcgcgggatggcgtggtg
gccgaagtgctggcccaacccggcgatcaggttgaggcgggggccgctcttgtccggttg
gaagccgaagcagaggacgctgcatga
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