KEGG   Solanum dulcamara (climbing nightshade): 129878167
Entry
129878167         CDS       T09577                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03020  RNA polymerase
sdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129878167
  09124 Replication and repair
   03420 Nucleotide excision repair
    129878167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129878167
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129878167
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129878167
  RNA polymerase III system
   RNA polymerase III
     129878167
  RNA polymerase I system
   RNA polymerase I
     129878167
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129878167
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N OB_RNR_1st
Other DBs
NCBI-GeneID: 129878167
NCBI-ProteinID: XP_055809416
LinkDB
Position
2:complement(79752981..79755948)
AA seq 207 aa
MSILSEEELSRLYRVRKTVLEMLNDRGYLVGEFEIKMSKQEFLQKYGENMKREDLVILKA
KCNNDSEQMYVFFPKGAKFGVEEMRPYTERMIKEKVFQAIFVIQQILTSCARSLISEVST
NLHLEIFQEIELLVNVKDHVLVPVHHPLTPEEKKSLLEQYTVKESQLPRIQITDPIARYY
GLKRGQIVKIIRPSETAGHYVTYRCVA
NT seq 624 nt   +upstreamnt  +downstreamnt
atgagtattctatcagaagaagagctctcaagactttacagagttcgtaagacagttttg
gaaatgttgaatgataggggctatcttgttggagaatttgaaataaaaatgtcaaaacaa
gagttccttcagaagtacggtgaaaacatgaagagagaagaccttgtaattctcaaagcc
aaatgcaacaacgattctgagcagatgtatgtgttctttcctaagggggcaaagtttggt
gttgaggaaatgagaccttatactgaacgcatgattaaagaaaaggtcttccaagcaatt
tttgttatacaacaaattttgacttcctgtgctcgtagcttgataagtgaagtatctaca
aacttacacttggagatcttccaggaaatagagttgttggttaatgttaaagatcatgtt
ctagttcctgtgcaccatccacttactcctgaagaaaagaaaagtttgttggaacaatat
actgtgaaagaatcacagcttcctcgaattcagatcaccgatccaattgctagatattat
gggctaaaacgtggtcaaattgtgaaaattatcagaccaagtgagactgcaggccattat
gtgacttaccgatgtgtggcttga

DBGET integrated database retrieval system