Solanum dulcamara (climbing nightshade): 129879989
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Entry
129879989 CDS
T09577
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129879989
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
129879989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
129879989
NCBI-ProteinID:
XP_055809750
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All DBs
Position
2:complement(3126837..3146917)
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AA seq
797 aa
AA seq
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MLQRSGWTRNIDVFFQWLSALPFSGGGFNDVAAAEGLASALMMFSSFNGSQQAQQNADGQ
RHCILVAASNPYPLPTPVYYPAMLNLEQSGNIEAHTSLRLADAEIVAKAFPQCSVSLSVI
CPRKLPKLRAIYNAGKHDPQAADPPVDASKNPNFLVLISENFSRDCAAFSHTEMESLAPN
QSLVEMDMTSVPPISGPANSSVMNQQPISAGNIPAAPVNIEPAMATSVGRPAPPHIPTAH
PTSQVAASLQSGLPISISEEMVPNNENTKETTPIVSVMTQSLSLPFSGAAANVGILNEVA
SAISTDPTVLTSGQLGFTSMTGFAPIARTDQISQNFGPASLTLMAPSIFGNSNHCMSQPL
SNILGGTGAGSQTVPVMSRVNLPGSQMMQSGIGMHQNVPSGTGIGMPSGQLLSKIPGAIG
AGSPTAHVMSQGNLPGSQMMQSRVGMHQNVPSGMDTSMPLGQLLSNIQGVIGEGNLTVPV
MSRGNLPGRQMMQSGIGMHRNVPTGMHTGMPSGQLLSNIQGGIDAGSLAAPVMSQGNFPG
SQMMPRGIGMHQNVPSGMGSSMPLEIGRMMPTPGMTQQGEPGILALGRNNSAEANMSLSQ
QQTMATSPSAQSGYVKIWETQLCKYHIQVSSINSWEKCSCKGNLSIVKRHEPEHISRLQG
YKRSSASESLAANLPQTLQILHIARKDHMIEQVRQHTGKADILVFWAIEEHELLNHLQEM
NMGGIISLPSHTLFLYVSDKTYRLIGMLLPYENMEFRPSIPNQQLQEQLSPQVEQLLEQP
ITGARYQEFLEFNSSSG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaagaagtggctggacaagaaacatagatgtgtttttccagtggctatcagct
ctacctttctcaggtggtggtttcaatgatgttgcagctgcagaaggccttgcttcagca
ttaatgatgttttcttcattcaatggaagccaacaagctcaacaaaatgctgatgggcaa
agacattgcatacttgttgccgcaagtaacccttatccattgcctacaccagtttattat
ccagctatgctgaatctggagcagagtggaaatattgaagcacataccagtcttcgacta
gctgatgctgagatagttgcaaaggcatttcctcagtgctctgtttccctctctgttata
tgcccaaggaagcttccgaaattaagagcaatatataatgcgggaaaacacgatccgcaa
gcagctgacccgcctgttgatgcgtctaagaatccgaattttcttgtattaatttcggaa
aatttcagcagggattgtgctgctttcagtcacactgaaatggaaagtttggcgccaaac
cagagcctggttgaaatggatatgacttctgtgcctccaatttccgggccagctaattca
tcagttatgaatcaacaacccatttcagctggaaatattcctgctgcaccggtaaatatc
gagcccgctatggcgacctctgttggtagacctgcacctccacatattcctactgctcat
cctacttctcaagttgctgcaagcttgcaaagtggtttacctatttctatttcagaggag
atggttccgaataatgagaatactaaggaaacaacacctattgtcagtgtgatgacacag
tccttaagtcttccatttagtggtgcagctgctaatgtcggaatattgaatgaagtggct
tctgctatatctactgatccaactgtattaacatcggggcaactaggtttcacatcaatg
actgggtttgctccaattgccagaactgatcagatatctcaaaacttcggtcctgcatca
ttaactttgatggctcccagtatatttgggaattctaaccattgcatgtcccaaccattg
agcaatatcctaggaggcactggtgcaggcagtcaaacagtacctgtaatgagtcgagta
aatcttcctgggtctcaaatgatgcaaagcgggataggcatgcaccagaatgtgccgagt
ggaacaggtattggtatgccttcgggacaactgttgagtaaaatcccaggagccattggt
gcaggcagtccaacagcacatgtaatgagtcaaggaaatcttcctgggtctcaaatgatg
caaagcagggtaggcatgcaccaaaatgtgccgagtggaatggatactagtatgcctttg
ggacaactattgagtaatatccaaggagtcattggagaaggcaatctcacagtacctgta
atgagtcgaggaaatcttcctgggcgtcaaatgatgcaaagcgggataggcatgcaccgg
aatgtgccaactggaatgcatactggtatgccttcgggacaactgttgagtaatatccaa
ggaggcattgatgcaggcagtctagcagcacctgtaatgagtcaaggaaattttcctggg
tctcaaatgatgccaagagggataggcatgcaccagaatgtgccaagtggaatgggtagt
agtatgcctttggaaattggcagaatgatgcctactccagggatgactcaacaaggagag
cctggaatattggctcttggcaggaataacagtgcagaagctaacatgtctctatctcag
cagcaaacaatggctacatcaccatcagctcagtcaggttacgtcaaaatctgggagaca
caactgtgcaaatatcacatccaagtttcatccatcaatagctgggagaaatgttcttgt
aaaggaaatttatcaattgtgaaaaggcatgaacctgaacatatttcgagactacagggg
tacaaaagatcatcagcttctgaatcgcttgctgcaaatttgccccaaacattgcaaatt
ctccacattgcccgcaaagatcatatgattgaacaagttaggcagcacactggaaaggca
gatattttagttttttgggcaatcgaggagcatgaacttcttaaccatctgcaagaaatg
aacatgggtggaataatttcactaccatcacatacattgttcctctatgtttctgataaa
acctaccgcttaattggaatgctgttaccttatgagaacatggagtttaggccatcaata
cccaatcagcagctgcaagaacaattgtctccccaagtagagcagctgctcgaacaacca
attactggggcgcgttaccaggaattcctagaattcaacagcagttctggttaa
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