Solanum dulcamara (climbing nightshade): 129882576
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Entry
129882576 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129882576
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129882576
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129882576
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129882576
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
129882576
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
129882576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
DNA_repr_REX1B
Trehalose_PPase
DUF6779
Motif
Other DBs
NCBI-GeneID:
129882576
NCBI-ProteinID:
XP_055812917
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All DBs
Position
3:47959929..47970840
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELMQQMQVKGVQVEELYSLDLDELNSLRPVYGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILLNSPDVDIGPELSALKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVEGVLYELDGLKEGPIS
LGPCPGGQGDIEWLRMVQPVIQERIERYSQSEIRFNLMAVVKNRKEVYTAELKELQKRRE
RILQQLAASQSERMVDCSQVESLNKSLAEVNSGIEAVSDKILREEEKFKKWKTENIRRKH
NYIPFLFNFLKILAEKKQLRPLIEKAKQKTTNPR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtgcactatcgagtctgatcctggggtttttaccgaacttatgcagcagatg
caagtaaaaggtgtgcaggttgaggagttgtattctttggatcttgatgagctcaacagt
cttaggcctgtgtatggcttgatattccttttcaaatggcgtcctggtgaaaaagatgat
cgccttgtgatcaaggacccaaacccaaacttattttttgctagtcaggtgataaacaat
gcttgtgctactcaagcaatcctttcaatcctcctgaacagtccagatgttgatattggc
ccagaattatctgcactaaaagaattcacaaagaatttcccaccggagcttaaaggttta
gctatcaataacagtgaagcaattcgcacagcccataatagttttgcaagacctgagcca
tttgtgcccgaggagcagaaagctgctggaaaagatgatgatgtatatcattttatcagc
tatatacctgtggagggtgtgttgtatgagcttgatggattgaaggagggaccaatcagt
cttggaccatgccctggtgggcaaggtgatattgagtggttgcgcatggtgcaacccgtt
attcaggaacgtattgagaggtattcccaaagtgaaataagattcaatctgatggctgta
gtaaagaacaggaaagaggtgtatactgcagagctgaaggagcttcaaaagaggagggag
cgtattctgcagcagcttgctgcatcccagtcggagagaatggtagattgcagccaagtg
gaatcactaaataaatccttagcagaagtaaattctggtattgaagctgttagtgataag
atattgagggaggaggagaagttcaagaaatggaaaactgaaaatatccgtcggaagcac
aactatataccctttctgttcaactttttgaaaattctagctgaaaagaagcagctgaga
cctcttatagagaaggccaaacagaaaaccaccaatcctagatga
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