Solanum dulcamara (climbing nightshade): 129882992
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Entry
129882992 CDS
T09577
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129882992
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129882992
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129882992
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129882992
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
129882992
Ion channels [BR:
sdul04040
]
Chloride channels
Chloride channel (CLC)
129882992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
129882992
NCBI-ProteinID:
XP_055813496
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All DBs
Position
3:75735353..75750190
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AA seq
793 aa
AA seq
DB search
MLSDHFQNGVETAKLMWSRIPATEEEEVGEVGPSRKGNGSTVESLDYEVVENYAYREEQA
KRGKLYMGYAVLVKWFLALLIGIGTGLAAVFINLSVENFAGWKFSLTFQIIQKSYFAGCL
VYILINLVLVLSSVYIITYFAPAASGSGIPEIKGYLNGIDTHGILLFRTLIGKIFGSIGS
VGGGLALGKEGPLVHIGACIASLLGQGGSTKYHLRSRWLQVFSSERDRRDLVTCGCAAGV
AAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKDGNCGHFGAGG
FIIWDISGGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYVTHWRRNYLHKKGIRVKII
EACLISVITSAISFGLPLFRRCTPCPEADANSGIECPQAPGMFGNYVNFYCQNSKEYNDL
ATIFFNTQDDAIRNLFSAKTAHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIG
STYGRLVGMFVVSFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPL
IMLVLLISKAVGDAFNEGLYEEQARLRAIPLLESRPKYQMRYMTAKEACGNQNVVYFPRV
VKVADVVSILRSNDHNGFPVVDHARTGETLVIGLILRSHLLVLLQSKVDFQHSPLPCDSR
GDLLPIRHNLSEFVKPVSSKGISLHDIHFTPDDLEMYIDLAPFLNPSPYVVPEDMSLTKV
YNLFRQLGLRHALVVPRPARVIGMITRKDLILEDNDDPAAVELQSTSVRGTLSNHRVIKR
KGDAQQPLLDGLL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagatcattttcaaaacggggtggagacggcgaagctgatgtggtcacggatt
ccggcgacggaggaggaggaagtcggtgaggtgggtccatcaagaaagggcaatgggagc
actgtggaaagtcttgattatgaagttgttgaaaattatgcttatagggaagaacaggct
aaaagaggaaagctttatatgggatatgctgttttggttaagtggttcttggcgttacta
attggaattggcacaggacttgctgctgttttcattaatctttctgttgaaaattttgcg
ggatggaagttctcattgacatttcagattattcagaagtcatactttgctggatgtctg
gtgtatattttgatcaacttggttctagtattatcttctgtatatattatcacatacttt
gcaccagcagcatcaggatcaggaattcctgaaataaagggttatctaaatggaattgac
acacatgggatccttcttttcagaactctgattggaaagatttttggaagcataggttca
gtgggaggtggtcttgctcttggcaaagaagggcctcttgtacatattggtgcttgtatt
gcttctttgcttggacaaggtggatccacaaaatatcacctgcggtcaaggtggctccaa
gtttttagcagtgaacgggatcgtcgtgatttggtgacttgtggatgtgctgctggagtt
gctgctgcttttagagctccagtaggtggggtattatttgctcttgaagaggtcacttct
tggtggaggagtcaactaatgtggcgggtcttctttacctctgcaattgtagctgttgtt
gtccgtacagcaatgggatggtgtaaagatggaaactgtggtcattttggcgctggaggc
ttcattatatgggatatctctggtggtcaagaggactattcttttgaggagttgttgccc
atggcagttattggagttataggaggtctccttggagctttattcaatcagcttactctc
tatgtaacacactggcgtagaaattacttgcacaagaaaggaattcgtgtgaaaattatt
gaagcttgtctcatctctgtgataacttcagctatttcctttggattgccactttttaga
agatgtactccgtgccctgaagccgatgctaattctggcattgaatgtccgcaagcacca
ggaatgtttggtaactatgttaatttttactgtcagaacagcaaggagtacaatgacctc
gcaaccatattcttcaacactcaggatgacgctataagaaatttattcagtgcgaagaca
gctcacgaattcagcgctcaaagcctactgacatttctggttatgttttataccttggct
gtggtaacctttggaactgcagttccagcaggtcagtttgtgccaggcatcatgatagga
tcaacttatggacgtcttgttggcatgtttgtggttagcttttataagaagctgaacatt
gaagaggggacgtatgctcttctaggtgctgcatcttttcttggaggctctatgcgtatg
actgtatctctctgtgtcatcatggtggagattacaaacaacttaaagcttttacctcta
ataatgctggttcttctcatctcaaaggctgttggtgatgcttttaatgaaggattatat
gaagaacaggctagattaagggcaattccattacttgaatctagaccaaagtatcaaatg
cgctatatgacggcaaaagaggcatgtgggaatcaaaacgttgtatacttccctcgggtt
gtgaaggttgcagatgtagtttctattttgaggagcaatgaccacaatggtttccctgtt
gttgaccatgcaagaactggggagacacttgttattggacttatactaagaagtcattta
ttggtgcttctacaatcaaaagttgattttcagcatagccctttaccctgtgattcaaga
ggtgatcttttgccaatcaggcacaaccttagtgaatttgtgaaacccgtttctagtaaa
gggatatctctccatgatatccatttcactccagatgatctggagatgtacattgatctt
gccccatttttaaacccgtctccgtatgttgttccagaagacatgtcattaacaaaggta
tataatctttttcgtcaactaggactgaggcacgcacttgttgttccacgccctgctcgt
gttattggcatgatcactcgaaaagatctgatacttgaggataatgatgatccagcggcc
gtagagctccaatcaactagtgtaagaggtacactatctaaccatagagtgatcaagagg
aaaggagatgcacaacagccgcttcttgatggtcttctttaa
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