Solanum dulcamara (climbing nightshade): 129892017
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Entry
129892017 CDS
T09577
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129892017
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
129892017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
DUF7281
Motif
Other DBs
NCBI-GeneID:
129892017
NCBI-ProteinID:
XP_055823513
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Position
6:587221..605306
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AA seq
362 aa
AA seq
DB search
MEGKRSNTQPLTLIRKIKGFTRSIVEDLARGRAPLIYIDRFRNYCTDTSGNCSCSSGLST
GKEAISLKRECHARRLDVLLRVLLIVQQLLQENRHGSKRDIYYMHPTVFKEQSVVDRAIN
DICILLQCSRHNLNVVSVGNGLVMGWLRYVESGRKIDCISNPNTAYPIPVLVEEVDDIIS
VAQYVLVVEKESVFQRLSNDQFCKRNRCIVITGRGYPDVPTRRFLRLLIDKLHLPVYCLV
DCDPYGFDILTTYKFGSLQMAYDATFLRVSEIQWLGVFFQDCDNYSIPQQCLLPLTAEDK
RKVEAILPRCYLQREVPQWRFELELLLQKGVKFEIEALSVHSLTFLSHEYLPSKIHNGGA
VF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaagcgttcgaacacgcagccgctaacactcataaggaaaatcaaaggattt
actcgttccattgttgaggatctcgctcgaggtagggcaccgttgatctacatcgatcgg
ttcagaaattactgtactgacacttctggaaattgttcttgcagctctggtttgtctacc
ggcaaggaagctatatccttgaagagggaatgtcatgcacgtaggcttgatgtcttgttg
agagttcttttgatagttcaacaacttctgcaagaaaacaggcatggatcaaaaagagac
atatattacatgcatcctactgtttttaaagaacaatcggttgttgatcgggcaattaat
gacatctgcatcctcttgcaatgcagccggcataaccttaatgtggtgtctgttggaaat
ggattggtgatgggctggctgcggtatgtggaatctgggaggaaaattgactgcattagc
aatcctaacactgcatacccgattcctgtccttgttgaagaggttgatgatattattagt
gttgctcaatacgttttagttgtggaaaaggaatcagttttccagcgactatcaaatgat
cagttttgcaagaggaaccgttgcattgtgataacaggaaggggttatcctgatgttccc
acaaggaggtttctgcgtctcctcattgacaagctgcatttgcctgtgtactgcctggta
gattgtgatccatatggctttgacatcttaactacatacaaattcggttctttgcaaatg
gcttatgatgcaacatttctacgagtctctgagattcaatggcttggagtatttttccag
gattgcgacaattatagcattccacagcaatgtctcctgcctttgactgcagaagataag
aggaaagttgaagcaatattacctagatgttatttgcaaagagaagtaccacaatggagg
tttgaactggagctgctgctgcaaaaaggagtgaagtttgagattgaagcgttgtctgtg
cattcactcacttttttgtcccatgagtatctaccatcaaagatccacaatggaggggct
gtattttga
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