KEGG   Solanum dulcamara (climbing nightshade): 129892072
Entry
129892072         CDS       T09577                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129892072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129892072
   03041 Spliceosome [BR:sdul03041]
    129892072
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129892072
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129892072
Spliceosome [BR:sdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    129892072
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 129892072
NCBI-ProteinID: XP_055823587
LinkDB
Position
6:complement(12802488..12805239)
AA seq 331 aa
MGSKKNDFDDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGF
ITYADPTVVDTVIAENHIINDKQVEIKRTIPKGTADSKDFKTRKIFVGGIPTTTTEDEFK
DFFSKFGKVIEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRIDMMGTQVEIKKAE
PKKPSNPASAPAYGSNSRGRGYGDSYGGFADSYSGFDSGGFGPSSYRSFGSRYGDYGYGG
GEFGGRYGDFGSSDFGGYRGDPSLGYSSRFGSYAGGYGGGYGSSGLGAYGRGGGYGGYGG
SGPGAGYGGPGGLYGSRGGYSGSGRYHPYTR
NT seq 996 nt   +upstreamnt  +downstreamnt
atgggttccaagaagaacgatttcgacgatggcgctagtcctggaaaaatctttattgga
ggtctagcgaaagagacgacgttagaacaatttgtgaagtactttgagaagtacggggag
ataatagactcggtgattatgaaagataggcatacgggtagacccagaggttttgggttc
atcacttatgcggatccaaccgttgtagacactgttatagccgaaaaccatattatcaat
gacaaacaagttgagattaaaagaaccatcccgaaaggaaccgctgattcaaaggatttt
aaaacaaggaagatttttgttggtggcattcctactaccacgaccgaagatgaattcaag
gactttttctccaagtttgggaaagtaatagagtatgagatcatacgagatcacgtgtcc
aagcgttctagaggctttggatttattgtgtttgacaatgaacaagtagttgataatttg
ctggctgagggaaataggattgacatgatgggtactcaggttgagatcaagaaggcagaa
ccaaagaaaccctcaaacccagcttctgctcctgcatatggtagtaactctagggggcgt
ggatatggtgatagttatggaggatttgctgattcatatagcggttttgacagtggaggt
tttggcccttcttcttataggtcatttggatctaggtatggtgactatggatacggtggc
ggtgaatttggtggtagatatggagactttggcagtagtgattttggtggttaccgtgga
gacccctcacttggttattctagtcgttttggctcgtatgctggtggttatggtggggga
tatggtagcagtgggctaggagcatatggccgtggaggtggttatgggggttatggtgga
tctggccctggtgctggttatggtggaccaggaggtttatatggaagtaggggagggtat
agtggcagtggtcgttaccatccttataccaggtag

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