KEGG   Solanum dulcamara (climbing nightshade): 129894982
Entry
129894982         CDS       T09577                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129894982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129894982
Spliceosome [BR:sdul03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129894982
 Complex B
    129894982
 Complex C
   U2 SnRNP specific factors
    129894982
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 129894982
NCBI-ProteinID: XP_055826560
LinkDB
Position
7:complement(16335831..16345746)
AA seq 509 aa
MSSTLLEVTRASHEEVERFERLIVKDLQTEPATNKDRLHQSHRVRNMIEQIIDTTHKLVD
IYEDKDGARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARAIIDTGDEYEQL
LKEEPQIEFSGEEGSGRYLDLHELFNEYINSKFGEPIEYTAYLNVFSQPQKIPRKAKSTR
QYLEYLQKLLEYLVYFFERTEPLQDLDRIFSKVTSEFEEEWTLGKVVGWENNGQENGSAS
ENHTVIDLDYYSTAEELMVVGPEKLKEALGALGLKTGGTIQQRAERLFLTKNTSLEKLDK
KHFAKGSRKPEQNGVVAAPQVGDVKEIALLEAKIRKLCDLLDETIVRTRENVEKKQALTY
EEMEAEREEDDVQAESESDEDDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKLLWERIQERQGVNKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactggaggtgactcgtgcatcgcacgaggaagttgaacgcttcgag
cggcttattgtgaaggatctccagactgagcctgctactaacaaggaccggctccaccag
agtcaccgcgttcgtaacatgatcgagcaaatcatcgacaccacacacaaactggtagat
atatatgaagacaaagacggtgcaaggaaggatgaaattgcagctctgggaggtcagaca
gcaactggaacaaacgtatttagtgcgttttatgacagattgaaagagattcgtgaatac
catagaaggcatcctgctgcgcgggctattattgatactggtgatgaatacgagcagctc
ctcaaagaagaaccacaaattgagtttagtggcgaggaaggttctgggcgataccttgac
ttacacgaattgtttaacgagtatatcaactccaaatttggtgagccaattgaatacaca
gcttatcttaatgtattttcccagccgcagaagattcctcgtaaagcaaagtcgacaagg
cagtacctagaatatttgcagaaactattggagtatctggtctatttttttgagcggacg
gagcccttgcaggatcttgataggatattctcaaaggtaacaagtgaattcgaagaggag
tggactttgggcaaggtagtaggatgggaaaataatggtcaggaaaatggaagtgcttca
gagaatcatactgtgattgatcttgattattatagtacagctgaggagctgatggtagtg
ggaccagagaagttaaaggaggcattgggagcactgggattgaaaacaggaggtactatt
cagcaacgtgctgagagacttttccttacgaagaatacatcactagaaaaactggacaaa
aagcatttcgcaaaaggctcgcggaaaccagaacaaaacggtgttgttgcagctcctcaa
gtgggtgatgtaaaagagattgctcttctggaagccaagataagaaagctatgtgatctg
ttggatgagaccattgtgcggacaagagaaaatgttgagaaaaagcaggctttgacatat
gaagaaatggaggcagaacgtgaagaggatgatgttcaggctgagtctgagagtgatgaa
gacgaccaacaaatttataatcctctgaaattgccaatgggttgggatgggaaacctatt
ccgtactggttatataaacttcacggtcttggtcaggagttcaagtgtgagatatgtggg
aaccatagttactggggccgtagggcttatgagcggcatttcaaggaatggagacatcaa
catgggatgcgttgtctcggtatcccgaatactaagaacttcaatgagatcacatcaatc
gaagaagccaagctactttgggaaagaatccaagaaagacaaggggtgaataagtggcgc
cctgatcttgaagaagaatatgaagatcaagagggcaacatctacaacaaaaagacatat
actgatcttcaacgccagggattgatttag

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