KEGG   Solanum dulcamara (climbing nightshade): 129896332
Entry
129896332         CDS       T09577                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    129896332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129896332
   03029 Mitochondrial biogenesis [BR:sdul03029]
    129896332
Membrane trafficking [BR:sdul04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    129896332
 Others
  Specific organelles associated proteins
   Auto phagosome
    129896332
Mitochondrial biogenesis [BR:sdul03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    129896332
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ATG16 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_DCAF4 WDR54 eIF2A Beta-prop_NWD2_C Beta-prop_EIPR1 KNTC1_N Cytochrom_D1 WD40_RFWD3 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 129896332
NCBI-ProteinID: XP_055828173
LinkDB
Position
7:10488611..10494115
AA seq 509 aa
MAYEEVAIEAIKHALKALRKRHLVEEGAHAPALAALNRPLVLQGSEWKEKAENLEVELQQ
CYKAQARLSEQLVVEVAESRASKSLVQEKEALINDLQNSQNQTRNECSHLTELLEEKTKA
LELLISEHQDLTAQLEAMTLRANNAEAENRTLVDRWMLQKMQDAERLNEANALYGDMLDK
VKASSIEKLARQQVDGVVRQSEDGAEFYLESSIPSTCKQRIPAHDGGCASILFEYNSSKL
ISGGQDRAIKMWDTTSGSLTNSLYGCLGSVLDLSITHDNKFIIAASSSNNLYVWDANSGR
IRHTLTGHIDKVCAVDVSKFSSRCVVSAAYDRTIKVWDLQKGYCTNTIIFHSNCNSLSFS
MDGLTICSGHVDGNLRLWDVQTGKLLSEVAAHSQAVTSVSLSRNGNMILTSGRDNLHNLF
DIRTLEICGTFRSNANRVASNWSRSCISPDDSYVTAGSVDGSVHIWSVSSNKMVSTLKEH
TSSVLCCSWSGLGNPLATSDKSGIVCIWS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcatacgaagaagttgcaatagaagcaatcaagcatgctttaaaggccctaaggaag
cggcatttagtggaagaaggtgctcatgcccctgctttggctgccctcaataggccgctg
gttttgcagggttcagagtggaaagagaaagctgaaaatcttgaagtggaacttcaacaa
tgttacaaagctcaagcacgactgtcagagcagcttgtggtggaagttgctgaatccaga
gcatcaaaatctttagttcaagagaaggaagctctcattaatgaccttcagaactctcaa
aatcaaacaaggaatgaatgttcacatttaactgaacttcttgaggaaaagactaaagct
ttggaattgcttatttccgagcaccaggatcttacagcacaacttgaagcaatgactctg
agagcaaacaatgctgaggcagaaaatagaacgttggttgaccgatggatgctgcagaag
atgcaggatgctgagcgccttaacgaggctaatgctctctatggagatatgcttgataag
gtcaaggcctccagtatagaaaaacttgctcgtcaacaagtggatggtgtggtccgccaa
agtgaagatggtgcagaattttacttagagtcttccattcctagtacatgcaagcaaagg
attcccgcccatgatggtggatgtgcctcgattctttttgagtataactccagtaaattg
ataagcggtgggcaggatcgggcaattaaaatgtgggatactacaagtggatcattaacc
aacagtctttatggttgtctgggttctgtccttgatctttccattacacatgataacaag
tttatcatagcagcaagtagttcaaataacttgtatgtgtgggatgcaaattcaggaagg
atacgccatactcttactgggcacatagacaaggtttgtgcagtcgatgtgagcaaattt
tcaagtcgttgtgtggtgagtgctgcatatgatcgcacaataaaagtttgggatctgcag
aagggttactgtaccaacactatcatatttcacagcaactgtaacagcctttcgtttagc
atggatggattgactatctgttccggtcatgttgatggtaatcttagattatgggatgtt
caaacaggcaagcttctgagcgaagttgcagcacattcacaggctgttacatcagtttca
ctctctcgaaatggaaacatgatattaaccagtgggagagacaacttgcacaatctattc
gatattcgcacccttgaaatttgtggcactttcagatcaaatgcaaacagagttgcatct
aattggagccgatcctgtatcagtccagatgacagttatgtaactgcgggttctgttgat
ggatctgttcatatttggtcagtatcaagcaataaaatggtgagcacattgaaagaacac
acatcctctgtactttgttgttcatggagtggtcttggtaatcctctggctacctcagat
aagagtggaatcgtatgtatttggtcatga

DBGET integrated database retrieval system