Solanum dulcamara (climbing nightshade): 129898633
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Entry
129898633 CDS
T09577
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129898633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129898633
Spliceosome [BR:
sdul03041
]
Common components
Common spliceosomal components
SR proteins
129898633
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
129898633
NCBI-ProteinID:
XP_055829231
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All DBs
Position
8:836062..842700
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AA seq
374 aa
AA seq
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MSRSSRTIYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSSNDRYNSGNSGHNGGRNNHKFGAPKRTEYRVLV
TGLPHSASWQDLKDHMRRAGDVCFSQVFREGSGTTGIVDYTNYDDMKYAIKKLDESEFRN
AFSRSTIRVKEHDSRSRSRSRSYSRGKSGSRSRSRSYSRSRSRSKSPKAKSSKRGRSRSR
SVSSQPRSGLKGRSVSRSPSRSRSPVPSRPKRVSKSPKRVSKSPKRASKSPKPRDSRRSQ
SLSKSPKPRDSRRSKSPSKSPKPRDSRRSKSVSKSPEPRNSRRSPSRSKSPKPRNSRRSP
SRSRSRSRSGSLSR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcaagtaggacaatttatgttggtaatcttcctggtgatattcgtgagcgc
gaagtggaggatctgttctacaagtatggtccgatagcacatattgatctgaaaattcca
ccaagaccccctggttatgcttttgttgagtttgaagaggcacgcgatgctgaagatgct
attcgcgggcgcgatggttatgattttgatgggcatcgcttgagggttgaacttgcacac
ggtgggcgtggtaactcatcatcaaatgatcgttataatagtggcaatagtggccataat
ggtggccgtaataatcacaaatttggagctcccaaacgtactgagtatcgagttttagtt
accggattgccccattcagcgtcctggcaggatctcaaggatcatatgcgtcgagctggg
gatgtttgtttctcacaagtattccgtgaggggagtgggaccactgggattgtggattat
accaactatgatgacatgaaatatgctattaaaaaacttgatgaatctgagtttcggaat
gctttttctcgttccacaattcgagtgaaagaacatgattctagaagccgcagccgcagc
cgttcttactcgagaggaaagagtggtagccgtagccgcagtcgaagttacagtcgtagc
cggagcagaagcaaatctcctaaagctaaatcgtcaaagcgtggaagatctcgttctaga
tctgtctcttctcagccccgttccgggttaaaagggcgctctgtgtcaagatctccatca
agatccagatccccagtgccatctcgcccaaaacgtgtgagcaaaagcccaaaacgtgtg
agcaaaagcccaaaacgtgcaagcaaaagcccaaaacctcgcgactccaggagaagccag
agcttgagtaaaagcccaaaaccgcgtgattcaaggagaagcaagagcccgagtaaaagc
ccaaaaccgcgtgattccaggagaagcaagagcgtgagtaaaagcccagaaccacgcaat
tccaggaggagcccaagcaggagcaaaagcccaaaaccacgtaattccaggagaagccca
agcaggagccgcagtcggagtcgcagtgggagtttgtcgaggtga
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