Solanum dulcamara (climbing nightshade): 129899464
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Entry
129899464 CDS
T09577
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129899464
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129899464
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GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_22
AAA_15
AAA_23
AAA_24
Ig_F54D1_6_2
Motif
Other DBs
NCBI-GeneID:
129899464
NCBI-ProteinID:
XP_055830417
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Position
8:75484867..75490160
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AA seq
603 aa
AA seq
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MVSDASKKREAQKKAAAAAKRGGKSKAAAMKAAAAATATPAESNSIDELTNGIGEIQLSD
RTCTGVLCSHPLSRDIRIESLSLTFHGHDLIVDSDLELNYGRRYGLLGLNGCGKSTLLSA
IGCRELPIPDHMDIFHLTREIEASDMPSLQAVISCDEERLRLEKEVEVLAAQDDGGGEQL
ERIYERLEALDASTAEKRAAEILFGLGFNKKMQEQKTRDFSGGWRMRIALARALFMNPTI
LLLDEPTNHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYSGN
YDQYVQTREELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERG
GLTEKVAKDKVLVFRFPNVGKLPPPVLQFVEVTFGYTSDNLIYKNLDFGVDLDSRVALVG
PNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMELSALQFMIKEYPGN
EEEKMRASIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHMLLLDEPTNHLDLET
IDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCENQTVTRWEGDIMDFKLHLKARAGL
GDE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggatgccagtaagaagagagaggctcagaagaaggcagcagcagccgccaag
agaggagggaagtctaaggcggcggcgatgaaggcggcagcggctgcaacagctactccg
gcggagagtaatagcattgatgaattgacgaatggtataggagaaattcagttgtctgat
cggacttgtactggtgttttgtgttcacatccactttccagagatattcggatagaatct
ttatcacttactttccacggacatgatcttatagttgattctgatctggagctcaactat
ggaagacgttatggtttgcttgggcttaatggctgtggaaagtctactcttctttctgct
ataggatgtcgtgaacttcccatcccagatcatatggatatctttcatctaacgcgagag
attgaagcatctgacatgccctcacttcaagctgttattagttgcgatgaagagaggttg
agattggaaaaagaagttgaagtcttggctgcacaggatgatggtggtggagagcaactt
gaacgcatttatgagcgtttggaagctttggatgcatcaactgctgagaagcgagcagct
gaaatcttgtttggtcttggatttaacaagaaaatgcaagaacagaaaacgcgagatttt
tctggtggctggaggatgaggattgctcttgctagggccctgttcatgaatccgaccatt
ttactgcttgatgaacccaccaatcatcttgacctggaggcttgcgtttggttagaagaa
accttgaagaagtttgaccgtattctggttgttgtttcacactctcaagattttctaaat
ggtgtgtgtactaacatcatccatatgcaaaataagaagttgaagctctacagcggtaat
tatgaccaatatgtccaaacccgtgaggagctggaagaaaatcagatgaaacagtacaga
tgggagcaggagcagattgcttcaatgaaggagtacattgctcgttttggacacggatct
gccaaactagcccgtcaagcacaaagtaaagagaaaacactggctaagatggagcgtgga
gggcttacagagaaggtggcgaaggacaaggtcctggtcttccgttttcctaatgttggc
aaacttccccctcctgttctgcagtttgtggaagtgacatttggctacacatccgataat
ctcatttacaagaacctagattttggcgtggaccttgattcaagggtagcactggtggga
cctaatggggctggaaagagcactctacttaagctgatgacaggggatttagttcccctt
gatggcatggttaggcggcataatcacttacggattgcacagttccaccaacacttggct
gagaaacttgacatggaattgtctgctcttcaattcatgataaaagagtatcctgggaat
gaggaggagaagatgagggcatcaattggaaggtttggccttactggtaaagctcaagta
atgcctatgaagaacttgtcagacggtcaacgtagtcgagtaatatttgcgtggttagct
tttaggcaacctcacatgctgcttctcgatgagccaaccaaccatctcgatcttgagaca
atcgactcacttgctgaggctttgaatgagtgggacggtggcatggttcttgttagtcat
gatttcaggctcataaaccaggttgcccacgagatatgggtatgtgaaaatcaaactgtg
acacggtgggagggtgacattatggacttcaagctacatttgaaggcgagggctggatta
ggtgatgagtga
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