Solanum dulcamara (climbing nightshade): 129899636
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Entry
129899636 CDS
T09577
Name
(RefSeq) NPL4-like protein 1
KO
K14015
nuclear protein localization protein 4
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129899636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129899636
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129899636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
ubiquitin
DUF685
Motif
Other DBs
NCBI-GeneID:
129899636
NCBI-ProteinID:
XP_055830624
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Position
8:complement(79093159..79097323)
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AA seq
411 aa
AA seq
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MMIRIRSRDGLERVTIDNPHATISQLKSQIESQLRVPVQSQTLSVNQNLLLAKTPDDWSR
FTDMANPHTTISSLNLTHGSMVYLAYEGERTIAGPAVQPAGSFGRKMTMDDLIAKQMRVT
RQENPHCELVSFDRDAANAFQHYVNETLAFAVKRGGFMYGTVSPEGKVQVDFIYEPPQQG
TEENLLLLRDPDEEKLVDAIAIGLGMRKVGFIFTQTISQDKKDYTMSTVEVLQAAELHSE
GDLKEWVTAIVKLEVNEDGAADVHFEAFQMSDMCVRLFKEGWFETDVKDEIDPKLSKMKK
DVVVGVKDTREVDNDFFLVVVKIADHQGPLSSSFPIENRIIPVSMNALKDHFNRTKSLSF
VKRISDFHLLLLLAKFLDINADVPALAECVLTQSAVPEGYQLLIQSMASAS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagaatcagaagcagagatgggttagagagagtcacaattgacaacccacat
gccacaatttcccaactcaagtcccaaatcgaatcccaacttcgagttccagttcaatct
caaaccctatctgtaaatcagaaccttttgctcgccaaaaccccagatgattggtctcgc
tttacagatatggcaaaccctcatacaacgatttcctctttgaacctcacccacggttcc
atggtctatctcgcttacgagggtgagcggaccattgccggtcccgctgtccagcccgcc
ggttcattcggcagaaagatgactatggacgacctaattgccaaacaaatgcgagttaca
agacaagagaaccctcactgtgagctggtttccttcgatcgtgatgcggccaatgcgttt
cagcattatgtcaatgaaacactggcttttgctgtgaaacggggtggttttatgtatggt
acagtatcgcctgagggaaaagtccaagtggattttatttatgagccgccgcagcaaggg
acagaggaaaacttgttgcttttacgtgatcctgatgaggagaaattggtggatgcaata
gctattggattagggatgaggaaagtagggtttatatttacacagacaattagtcaggat
aaaaaggattacacaatgtcaactgtggaagtcctacaggcagctgagttacattcggag
ggtgatttgaaggagtgggtgacagctatagtgaagcttgaggtgaatgaggatggtgct
gccgatgtacattttgaggctttccagatgagtgatatgtgtgttagattgttcaaggaa
gggtggtttgagacagatgttaaggatgagattgatccaaagctttcaaagatgaagaaa
gatgtggtggtaggagtaaaggacacaagagaagttgataacgactttttcttggtggtt
gttaagattgctgatcaccagggtccactttcttcatcatttcccattgaaaacaggatt
attccagtgagcatgaatgcattgaaggatcatttcaatcgaacaaagagtctttctttt
gtgaagcgaatctcagatttccatctgctactgttgctggccaagtttctggacattaat
gcagatgttcctgcattggcggaatgcgtgcttacacagtcagctgtcccagaaggttac
cagctccttatccaatccatggctagtgcctcttga
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