Streptomyces durmitorensis: M4V62_33810
Help
Entry
M4V62_33810 CDS
T08503
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sdur03051
]
M4V62_33810 (pafA)
Enzymes [BR:
sdur01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
M4V62_33810 (pafA)
Proteasome [BR:
sdur03051
]
Prokaryotic proteasome
Bacterial regulatory particles
M4V62_33810 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UQT59643
UniProt:
A0ABY4Q332
LinkDB
All DBs
Position
7566849..7568210
Genome browser
AA seq
453 aa
AA seq
DB search
MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFVERRGIRTGTV
EQVLELWGRTLDAIEAEDLDRIGTEIDWVMKYKLIERYRAKNNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaatgagtacggcgtcacgtgcacgtttagggga
cagcgccgtctgtcgcctgacgaggtggcgcgctacctcttccgccgtgttgtctcatgg
ggccgcagcagcaacgtctttctgcggaacggcgcccgcctctatcttgacgtcgggtca
catccggaatacgcgacaccggaatgtgacaacgtgaccgagctggtcacccacgacaaa
gcgggcgagcgcattctggaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgactcggcgggaaactcctac
ggctgccacgagaactatctggtggcccggcacggggagttctcgcggctcgcggacatc
ctcattcccttcctcgtcacgcgacagctgctctgcggcgcgggcaaggtgctgcagact
ccacgcggcgccgtgtactgcgtcagccagcgtgccgagcacatctgggaaggggtctcc
tccgcgaccacccgctcccggccgatcatcaacacccgcgacgaaccgcacgcggacgcc
gagcgctaccgcaggctgcacgtcatcgtcggcgactcgaacatgtccgagacgaccatg
ctcctgaaggtcggcgccaccgacctcgtcctgcgcatgatcgaagcgggcacggtgatg
cgggacctgaccctggagaacccgatccgggcgatccgcgaggtcagtcacgacatcacg
ggccgtcgcaaggtgcgcctggccagcggccgcgaggcctccgccctcgaagtccagcgc
gagtactacgagaaggccgtggacttcgtggagcgccgcggcatccgcacgggcacggtc
gagcaggtcctcgaactgtggggccgcacgctcgacgcgatcgaggccgaggacctcgac
cgcatcggcaccgagatcgactgggtcatgaagtacaagctcatcgagcggtaccgagcg
aagaacaacatgaccatgtcgcatccgcgggtcgcgcagatagacctcgcgtatcacgac
atccaccgccgtcgcgggctgtactacctcctggagaggaagggccaagccgcccgtatc
tgcaacgacttgaagatcttcgaaggcaagtcggtaccgccgcagaccacccgcgcgcgg
ctgcgcggcgacttcatccgcagggcccaggagcagcgccgcgacttcacggtcgactgg
gtgcacctgaagctcaacgaccaggcacagcgcaccgtgttgtgcaaggaccccttccgt
tcggtggacgaccgggtggagaaactgatcgccggcatgtaa
DBGET
integrated database retrieval system
