Streptomyces decoyicus: K7C20_19960
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Entry
K7C20_19960 CDS
T07553
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdw
Streptomyces decoyicus
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdw03021
]
K7C20_19960
Transcription machinery [BR:
sdw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K7C20_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
DUF7343
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QZY17246
LinkDB
All DBs
Position
complement(4546503..4547339)
Genome browser
AA seq
278 aa
AA seq
DB search
MSVELGSSKVLPAIPAPAPHVHDDDAINTRTLSRSLFLRLASLDKDCAERTYVRDTLIEL
NLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRF
FRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVPELALCLGVSEEDVVDGLAVGN
AYTASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLRF
FANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgcttcccgcgattcccgcgcccgcaccgcac
gtgcatgacgacgacgccatcaacacccgcacgctctcccgctccctgttcctgcggctg
gcctcgctcgacaaggactgcgcggaacgtacgtacgtccgagacacgctcatcgaactg
aacctccctctggtgcgctacgccgcggcccgcttccgcagccgcaacgaaccgatggag
gacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgtttcgactgcgaa
cgcggcgtggaattcccgacgttcgcgatgccgaccgtggtcggcgagatcaagcgcttt
ttccgtgacacgtcatggtcggtacgggtcccgcgccggctccaggagctccggctcgcc
ctcaccaaggccagcgacgagctctcccagaagctggaccgctccccgaccgtccccgaa
ctggccctgtgcctgggggtgtcggaggaggacgtggtcgacggcctggccgtcggcaac
gcgtacaccgcctcctcgctcgactccccctcccccgaggacgacggcggcgagggctcc
ctcgcggaccgcctcggctacgaggacaccgccctggagggcgtggagtaccgcgagtcc
ctcaagcccctgctggccaaactcccgccccgcgagcgccagatcatcatgctgcgcttc
ttcgccaacatgacgcagtcccagatcggcgaggaggtcggcatctcccagatgcacgtc
tcccgtctgctcacccgcaccctggcgcagctgcgcgagggcctcatctccgactga
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