Streptomyces dengpaensis: C4B68_16095
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Entry
C4B68_16095 CDS
T06611
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C4B68_16095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdx03021
]
C4B68_16095
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_16095
Enzymes [BR:
sdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C4B68_16095
Transcription machinery [BR:
sdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C4B68_16095
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C4B68_16095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AVH57047
UniProt:
A0ABN5I322
LinkDB
All DBs
Position
complement(3552891..3553913)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
accctcctctcctcgatccccggcgctgctgtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggttgtctcctcggagcacgacgagcctgtcgtgatgtacctgcgcaagcag
gggccgggtctggtcaccgccgctgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggttacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgatgtcgagaccaagcag
gccatgcgtccgcgtgacgccatggcttccgccggtaagacgctggtcgagctcttcggg
ctcgcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctggccgccgatctcgcgctgccgatcgaggagctcgagctcaccgttcgctcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctcctggacatccgcaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccgggatgggtctcgccctgaaggacagcccgcccggattcgaccccacggccgcg
gccgacgctttcggggccgatgacgacgccgacgccggttttgtcgagaccgagcagtac
tga
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