Streptomyces dengpaensis: C4B68_16720
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Entry
C4B68_16720 CDS
T06611
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4B68_16720 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdx03019
]
C4B68_16720 (recQ)
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_16720 (recQ)
Enzymes [BR:
sdx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4B68_16720 (recQ)
Messenger RNA biogenesis [BR:
sdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C4B68_16720 (recQ)
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4B68_16720 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AVH57154
UniProt:
A0A2L2MKU8
LinkDB
All DBs
Position
complement(3667267..3669246)
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AA seq
659 aa
AA seq
DB search
MGGTGVMTGADTTETLGESEALATLHRVFGYDAFRGEQEAIVEHVVAGGDAVVLMPTGGG
KSLCYQIPALVRPGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVVEAEFL
AGELDLLYLAPERLRLDTTLDLLSRAKISVFAIDEAHCVAQWGHDFRPDYLALSLLGERW
PDVPRIALTATATRATHREITQRLGMPEARHFEASFDRPNIQYRIIAKADPRKQLLSFLR
EEHAGDAGIVYCLSRNSVEKTAEFLSRNGIEAVPYHAGLDAGTRAAHQSRFLREEGLVVV
ATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLQDVVQQRKL
IQSGEGDEAFRRRAATHLDSMLALCETVQCRRSQLLAYFGQDQRTPACGNCDTCLAPPET
WDGTVAAQKLLSTVVRLQRERGQKFGAVQIVDILLGRRTAKVIQFDHDQLSVFGIGEDLS
DSEWRGVVRQLLAQGLLAVEGEYGTLVLTEASGTVLRREREVPLRKEPPKPAVSRSSASK
GERKAKTAAAELPPELVPAFEALRSWRAEQAREQGVPAYVIFHDATLREIATVWPTSVSD
LGGISGVGEKKLVTYGEGVVGVLASLGGAPGRAPTPETGEGPDPDWPEMDEEPGPEDWI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggacaggtgtgatgaccggagcggacacgacggagacactcggtgagagcgag
gcgctggccacgctccaccgggtcttcggatacgacgccttccgcggcgagcaggaagcg
atcgtcgagcatgtggtggcgggcggtgacgccgtcgtcctgatgccgacgggtggcggc
aagtcgctctgctaccagattccggcgctggtcagaccgggtacgggcgtcgtggtctcc
ccactcatcgcgctgatgcaggaccaggtggacgcgctgcgggcgctgggcgtgcgcgcc
gggttcatgaactccacccaggacttcgacgagcgccgggtggtggaggcggagttcctg
gcgggggaactggacctgctctacctggcccccgagcggctgcggctggacacgacgctc
gacctgctgtcgcgcgcgaagatctcggtcttcgcgatcgacgaggcgcactgtgtggcc
cagtggggccacgacttccgccccgactatctggcgctctcgctgctgggtgagcgctgg
ccggacgtcccgcggatcgcgctgacggccacggccacccgcgccacacacagggagatc
acccagcggctgggcatgcccgaggcccgccacttcgaggcgagcttcgaccgtcccaac
atccagtaccggatcatcgcgaaggccgaccccaggaagcagctgctgtccttcctgcgc
gaggagcacgcgggcgacgcgggcatcgtgtactgcctctcgcgcaactccgtggagaag
accgccgagttcctctcccgcaacggcatcgaggcagtgccgtaccacgcgggcctggac
gcgggcacccgcgccgcccaccagtcgcgcttcctgcgcgaagagggcctggtcgtggtc
gccaccatcgccttcggcatgggcatcgacaagccggacgtacggttcgtcgcccacctc
gacctgccgaagtccgtcgagggctactaccaggagacgggccgcgcgggccgcgacgga
ctgccgtccacggcctggatggcgtacggcctgcaggacgtggtccagcagcgcaagctg
atccagagcggggagggcgacgaggcgttccgccgccgggcggccacgcatctggactcg
atgctggcgctgtgcgagacggtccagtgccggcgctcccagctcctggcctacttcggc
caggaccagcggacccccgcgtgcggcaactgcgacacgtgtctggcacctcccgagacc
tgggacggcacggtcgcggcgcagaagctgctgtccaccgtggtgcggctgcagcgcgag
cgggggcagaagttcggcgcggtacagatcgtcgacatcctgctggggcgccggacggcc
aaggtcatccagttcgaccacgatcagctgtccgtcttcggcatcggggaggatctgtcc
gactccgaatggcggggtgtcgtacggcagttgctggcccaggggctgctcgcggtcgag
ggcgagtacgggacgctggtgctgaccgaggccagcgggacggtgctgcggcgcgagcgc
gaggtgccgttgcgcaaggagccgccgaagccggccgtgtcccgctcgtcggcctccaag
ggcgagcgcaaggccaagaccgccgcggccgagctgcctccggagctcgtccccgccttc
gaggccctgcgctcctggcgcgccgaacaggctcgcgagcagggcgttcccgcgtacgtg
atcttccacgacgcaacgctgcgggagatcgccacggtgtggcccacctcggtgagcgac
ctgggcggcatcagcggtgtcggcgagaagaagctggtgacgtatggggagggggtcgtg
ggggtgctcgcctcgctgggcggcgctcccgggcgagcgcctactccggagacgggtgag
gggccggacccggactggcccgagatggacgaggagcccgggccggaggactggatatag
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