Streptomyces dengpaensis: C4B68_32490
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Entry
C4B68_32490 CDS
T06611
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sdx
Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sdx03051
]
C4B68_32490 (pafA)
Enzymes [BR:
sdx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
C4B68_32490 (pafA)
Proteasome [BR:
sdx03051
]
Prokaryotic proteasome
Bacterial regulatory particles
C4B68_32490 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AVH59690
UniProt:
A0ABM6SXZ1
LinkDB
All DBs
Position
7052939..7054300
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFCERRGIRTGTV
EQVLELWGRTLDAIEAEDLDRIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgtacgttcagggga
cagcgccgcctgtctcccgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcggaacggtgcccgcctttacctcgacgtgggatca
catccggaatacgcgacacccgaatgtgacaacgtgacggaactcgtcacccacgacaag
gccggcgagcgcattctcgaaggactcctggtggacgccgaacgacgcctgcacgaggaa
ggaatcgcgggcgacgtctacctgttcaagaacaacaccgactcggcgggcaactcctac
gggtgccatgagaactatctggtggcccggcacggggagttctcccggctcgcggacatt
ctcattccgttcctggtcacgaggcagctcctgtgcggtgccggcaaggtgctgcagacc
ccgcgcggtgccgtgtactgcgtcagccagcgggcggagcacatctgggagggcgtcagc
tccgcgacgacccggtcccggcccatcatcaacacccgcgacgaaccgcatgcggacgca
gagcgttaccgccggctgcatgtcatcgtcggcgactcgaacatgtccgagacgaccatg
ctgctcaaggtcggcgccaccgacctcgtgctgcggatgatcgaggcgggcacggtcatg
cgtgacctcaccctggagaacccgatccgggcgatccgcgaggtcagccacgacatcacg
ggccggcgcaaggtgcgcctggccagcggccgcgaggcttccgcgctggaggtgcagcgc
gagtactacgagaaggccgtggacttctgcgagcgccgcggcatccgcaccggaacggtc
gagcaggtcctcgaactgtggggccgtacgctcgacgcgatcgaggccgaggacctcgac
cggatcggcaccgagatcgactgggtgatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgacgatgtcgcacccgcgggtcgcgcagatagaccttgcgtaccacgac
atccaccggcgtcgtggtctgtactacctgctggagaagaaggggcaagccgcgcggatc
tgcaacgacttgaagatcttcgagggcaagtcggtgccgccgcagaccactcgggcgcgg
ttgcgtggtgacttcatccggcgggctcaggaacagcgccgcgatttcacggtggactgg
gtccatctgaagctgaacgaccaggcgcagcgcaccgtgttgtgcaaggacccgttccgt
tcggttgacgaccgggtggagaagctgatcgctggaatgtga
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