Shigella dysenteriae Sd197: SDY_1004
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Entry
SDY_1004 CDS
T00306
Symbol
ycdW
Name
(GenBank) putative dehydrogenase
KO
K12972
glyoxylate/hydroxypyruvate reductase [EC:
1.1.1.79
1.1.1.81
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00260
Glycine, serine and threonine metabolism
sdy00620
Pyruvate metabolism
sdy00630
Glyoxylate and dicarboxylate metabolism
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
SDY_1004 (ycdW)
00630 Glyoxylate and dicarboxylate metabolism
SDY_1004 (ycdW)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SDY_1004 (ycdW)
Enzymes [BR:
sdy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.79 glyoxylate reductase (NADP+)
SDY_1004 (ycdW)
1.1.1.81 hydroxypyruvate reductase
SDY_1004 (ycdW)
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Motif
Pfam:
2-Hacid_dh_C
NAD_binding_2
DUF551
Motif
Other DBs
NCBI-ProteinID:
ABB61170
ShiBASE_China:
SDY1004
UniProt:
Q32HN5
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All DBs
Position
complement(950981..951958)
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AA seq
325 aa
AA seq
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MRINFTQRFSGVSMDIIFYHPTFDTQWWIKALRKAIPQARVRAWKSGDNDSADYALVWHP
PVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPYVPLFRLEDTGMGEQMQEYAVSQV
LHWFRRFDDYRIQQNSSHWQPLPEYYREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSR
TRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLAR
GVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVE
YISRTIAQLEKGERVCGQVDRARGY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaataaatttcacacaacgcttttcgggagtcagtatggatatcatcttttatcac
ccaacgttcgatacccaatggtggattaaggcactgcgcaaagctattcctcaggcaaga
gtcagagcatggaaaagcggagataatgactctgctgattatgctttagtctggcatcct
cctgttgaaatgctggcagggcgcgatcttaaagcggtgttcgcactcggggccggtgtt
gattctattttgagcaagctacaggcacaccctgaaatgctgaacccttatgttccactt
tttcgcctggaagataccggtatgggcgagcaaatgcaggaatatgctgtcagtcaggtg
ctgcattggtttcgacgttttgacgattatcgcatccagcaaaatagttcgcattggcaa
ccgctgcctgaatattatcgggaagattttaccatcggcattttgggcgcaggcgtgctg
ggcagtaaagttgctcagagtctgcaaacctggcgctttccgctgcgttgctggagtcga
acccgtaaatcgtggcctggcgtgcaaagctttgccggacgggaagaactgtctgcattt
ctgagccaatgtcgggtattgattaatttgttaccgaatacccctgaaaccgtcggcatt
attaatcaacaattactcgaaaaattaccggatggcgcgtatctcctcaacctggcgcgt
ggtgttcatgttgtggaagatgacctgctcgcggcgctggatagcgggaaagttaaaggc
gcaatgctggatgtttttaatcgtgaacccttaccgcctgaaagtccgctctggcaacat
ccacgcgtgacgataacaccacatgtcgccgcgattacccgtcccgctgaagctgtggag
tacatttctcgcactattgcccagctcgaaaaaggggagagggtctgcggtcaagtcgac
cgcgcacgcggctactaa
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