Shigella dysenteriae 1617 (serotype 1): Asd1617_05796
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Entry
Asd1617_05796 CDS
T02933
Name
(GenBank) SRNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz02024
Quorum sensing
sdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asd1617_05796
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Asd1617_05796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdz03019
]
Asd1617_05796
03036 Chromosome and associated proteins [BR:
sdz03036
]
Asd1617_05796
Messenger RNA biogenesis [BR:
sdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Asd1617_05796
Chromosome and associated proteins [BR:
sdz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Asd1617_05796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AHA68623
UniProt:
E2XDZ9
LinkDB
All DBs
Position
complement(4070800..4071108)
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AA seq
102 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTSSNYHHGSSPQNTSAQQDSEETE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcctgaacgcactgcgtcgggaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaagggcaaatcgagtcttttgat
cagttcgtgatcctgttgaaaaacacggtcagccagatggtttacaagcacgcgatttct
actgttgtcccgtctcgcccggtttctcatcacagtaacaacgccggtggcggtaccagc
agtaactaccatcatggtagcagcccgcagaatacttccgcgcaacaggacagcgaagaa
accgaataa
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