Sedimenticola thiotaurini: AAY24_14605
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Entry
AAY24_14605 CDS
T03943
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAY24_14605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seds03021
]
AAY24_14605
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_14605
Enzymes [BR:
seds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAY24_14605
Transcription machinery [BR:
seds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAY24_14605
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAY24_14605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKH21389
UniProt:
A0A0F7K1D5
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All DBs
Position
3165389..3166387
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AA seq
332 aa
AA seq
DB search
MPEFVTDFLKPRLVSVQPLSELHAKVSLEPMERGFGHTLGNSLRRILLSSMPGSAVVEAE
IDGVLHEYTSIEGVQEDVLEILLNLKGLAIIMHARDEATLTLKKKGPGPVLASDITLDHD
VEIANPDHVIANLTKDGEISMTLKVARGIGYQPAANRQTDSMEDRPIGRLQLDASFSPVR
RVAYAVEATRVEQRTDLDRLVIDLETNGTIDPEEAIRRAATILQDQLSAFVKLDETATAE
KEVEEDRPAIDPILLRPVDDLELTVRSANCLKAENIFMIGDLIQRTEVELLKTPNLGKKS
LTEIKDVLATRGLSLGMRLENWPPEGMEDNGR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtttgttaccgattttcttaagccgcgactcgtcagtgtacagccgttgagc
gaattgcatgccaaggtttcactcgagccgatggaacgtggctttggtcatacacttggc
aactcattgcgtcgaatcctgctctcctccatgccggggagtgcggtggtcgaagctgaa
atcgacggtgtgcttcacgagtacaccagtatcgaaggcgttcaggaagatgtcctggag
attctgctgaatctgaagggactggcgatcatcatgcacgctcgtgatgaggccactttg
acgctgaaaaagaaaggtcccggcccggtgttggcaagcgatatcacgcttgatcacgat
gtggagattgccaacccggaccacgtgatcgccaacttgaccaaagatggcgagatcagc
atgaccctgaaagtggcacgcggtattggttaccagcccgctgcgaatcggcaaaccgac
agcatggaagatcgacccattggtcgcctgcagttggatgccagcttctcgccggtccgc
cgtgtcgcttatgcagtcgaagcgacccgtgtagagcagcgtaccgatctggatcggctg
gtcattgatctcgagaccaatggtactattgatccggaagaggcgatccgcagagcggcc
accatccttcaggatcagttgtcggcttttgttaagctcgatgagaccgccacggcagag
aaagaggttgaagaggatcgtccggctatcgatccaatcctgctgcgtccggtagacgac
cttgaactgacggtgcgttctgccaactgtctcaaggcggaaaacatatttatgatcggt
gatctgattcagcggacagaggttgaactgctgaagaccccgaatctgggtaaaaagtca
ctcaccgaaatcaaggatgtacttgccaccagaggcttgtctctgggcatgaggctggaa
aactggccgccggaaggtatggaagataacggtcgataa
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