Sedimentibacter sp. zth1: JYG23_10690
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Entry
JYG23_10690 CDS
T07110
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00260
Glycine, serine and threonine metabolism
sedz00460
Cyanoamino acid metabolism
sedz00630
Glyoxylate and dicarboxylate metabolism
sedz00670
One carbon pool by folate
sedz00680
Methane metabolism
sedz01100
Metabolic pathways
sedz01110
Biosynthesis of secondary metabolites
sedz01120
Microbial metabolism in diverse environments
sedz01200
Carbon metabolism
sedz01230
Biosynthesis of amino acids
sedz01240
Biosynthesis of cofactors
sedz04981
Folate transport and metabolism
Module
sedz_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JYG23_10690
09102 Energy metabolism
00680 Methane metabolism
JYG23_10690
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JYG23_10690
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JYG23_10690
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JYG23_10690
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JYG23_10690
Enzymes [BR:
sedz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JYG23_10690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
QSX05147
LinkDB
All DBs
Position
complement(2206580..2207803)
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AA seq
407 aa
AA seq
DB search
MNFDLIKEFDGALYSAMMEEKERQQNNIELIASENFVSERVLEAMGSHLTNKYAEGYPGK
RYYGGCQFVDKVENLARDRMKELFHADHANVQPHSGSNANFGVYFSVLMPGDKILGMNLS
HGGHLTHGSPVNMSGKYFNIASYGVNKDTERIDYDEVREIAKKEQPKLIIAGASAYPRAI
DFKAFREIADEVGAYFMVDMAHIAGLVAAGLHANPVEYADFVTTTTHKTLRGPRGGAILC
KEQFAKKLDKAIFPGIQGGPLEHIIAAKAVCFQEALQPEFKEYQKVIVENANVLAQALTE
KGFRLVSGGTDNHLILLDLRNKDITGKEAEKLLDEINITTNKNTIPFDPQSPFITSGLRI
GTPAVTTKGMRKAEMIELADIMDKAICKKEKPEILKGRVLELTKKFH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatttaattaaagaatttgatggcgccctttatagtgctatgatggaagaa
aaagaaagacaacaaaataacattgaactaattgcatcagagaactttgtgtcagaaaga
gtattagaagctatgggtagtcatttgactaacaaatatgctgaaggttatcctggaaaa
agatattatggaggatgccagtttgtagataaagttgaaaatttagcaagagatagaatg
aaagaattatttcatgctgatcatgcaaatgtacaacctcattcaggatcaaatgcaaac
tttggagtttacttttcagttttaatgcctggtgataaaatattaggtatgaatttatct
catggtggtcacttaacacatggttcaccagtaaacatgtcaggtaaatactttaatatt
gcatcatatggagtaaataaagacaccgaaagaattgactatgatgaagttagagaaata
gctaaaaaagaacaacctaagttaataattgctggagcaagtgcttatccaagagcaata
gatttcaaagcatttagagaaattgctgatgaagttggagcttattttatggtagatatg
gctcatattgcaggattggttgcagcaggcttacatgcaaatccagtagaatatgcagat
tttgtaacaactactacacataagacattaagaggaccaagaggtggagctatactttgc
aaagagcaatttgctaagaaattagataaagctatattcccaggaatacaaggtggtcca
ttagagcatataatagcagcaaaggcagtatgcttccaagaagcattacaacctgaattt
aaagaatatcaaaaagttatagttgaaaatgcaaatgtattagcacaagctctaacagaa
aaaggatttagattagtttcaggtggtacagataatcacttaattctattagatttaaga
aacaaagatataactggaaaagaagcagaaaaactattagatgaaataaatataactact
aataaaaatacaattccattcgatccacaatcaccatttattactagtggactaagaata
ggaactcctgctgtaacaacaaaaggtatgagaaaagcagaaatgatagaattagccgat
attatggataaagctatttgtaaaaaagaaaaaccagaaatacttaaaggtagagtatta
gaattaactaaaaaatttcattaa
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