Slackia exigua: M1L65_02605
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Entry
M1L65_02605 CDS
T11352
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
seig Slackia exigua
Brite
KEGG Orthology (KO) [BR:
seig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seig03400
]
M1L65_02605
Enzymes [BR:
seig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M1L65_02605
DNA repair and recombination proteins [BR:
seig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M1L65_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Replicase
Motif
Other DBs
NCBI-ProteinID:
XQM00428
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Position
609964..613683
Genome browser
AA seq
1239 aa
AA seq
DB search
MNKDAFNPDQRVCVETLDAPLFVAAGAGSGKTFTLTQRIAWALLDGSGSDGGPFASSIDE
IMAITFTDKAASEIKARVKSTLRAEGLAEESLKVDSAWISTIHGACARILREHALELGID
PDFQMASDGFVADALAQAVEEVLIGHEEGSADGSVDALFAAYPPRSTGHGGTSVEDMLMD
IAQAAAESPAGMDSVVDAGAGPAPVVLAQQALDLARTIAPSLAGLNDSSSKREFEAALHG
CEQKLDELLSSWSEGADERFLGILGAFPMPKRTFGKGDNPYAAHVGEWAQELAEICLNAL
QASARIHFATLRGLASDVLAAFERIKREACVLDNTDLVTKAHRALEDHPAIAREYAHAFR
LVMIDEFQDTDQMGIDMVMRLSDGGARLCTVGDAQQSIYRFRGADVGVFRAHEARMRALG
DAAMVRTLDTNYRSNADVLSFVDCLFSGRAMFGASFMSLRPGRDESRIDAPYRGSAPRIQ
VVLVQRSKPPKGSSIDSSCKTAVAADAIARRFERLRAEGHRARDMVVLLGRMTNADAFAR
ALRGRGFECVIAGGSLFGEAPETRAVVSLVRAIANPNDETALLDTLESDLFAVGDDDILS
LVTECREDGSIARRALARGFWDLLDREPTVGISQGLAHAASVLDACCRMAEMSTVEDILL
HALAASGWLARLESQGAEGIARAGNALKAVRFAAGLAAELGCGIAGVASAMPDRIARAKE
APGALSAGEGDFVRIMTVHSSKGLEFPIVAVAEIGKGKEPTNEAFLSTRIKGVTYATLLP
RSAFLPKELKKKADTFVLPEDVRADVDRLVASSESPASRRRATVAHETEQGRQEAQRLMY
VALTRASEALVLVMDVDDNAAHDIRAYAPLDGAIRDSIMGFGGDPLADFPSGASTLPYGG
SEDAAFERIVIGVNDEGGVIVTGGDGEAYRWGDADADEGEKRVFAIPEAMPSRMPSVPFG
PEREGFESYTSLSSLAGALDANKGGASATAREGVPSFDEASEAGIDPFADDAEEGAFGRA
GAAFALDEDRATDVGAAFHALAQWSVEEFGSELSSRRCDASRREGLPLPPPDRIEATARA
FGVSSSAAPRLEAACLRWTGSACAREAIAWPNLHAEYPFFIPMGASSDGSEEWVLEGSMD
LFSGEEDGSCARIVDYKTGGRFDDAPEDILERHRLQATCYAFAALSSGYDRVEATFVYVE
QSDWHREGEPRCVVYSFDAADLDGMRDLLEAIHARRVCP
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggatgcattcaatccggatcagcgtgtctgcgtcgaaacgctggacgcgcct
ttgttcgtcgctgcgggtgcgggcagcggcaagacgttcacgctgacccagcgcatcgcc
tgggcgctgctcgacgggtcgggttccgacggcggtcccttcgcgtcttccatcgacgag
atcatggccatcaccttcaccgacaaggcggcgagcgagatcaaggcgcgcgtcaaaagc
acgttgcgcgccgaggggcttgcggaagagtccctcaaggtcgattccgcctggatatcc
accattcatggcgcctgcgcccgcatcctgcgcgagcacgccttggaactcggcatcgat
cctgatttccagatggcttccgacggcttcgtcgccgacgcgctcgcccaagcggtcgaa
gaggtgttgatcggtcacgaagaaggatcggccgacggttcggtcgacgcgctgttcgcc
gcatatccgccgcgctcgacagggcatggaggcacgtcggtcgaggacatgctgatggat
atcgcgcaggcggcggccgagtcgcctgcgggtatggattccgtcgtcgatgcgggcgcg
ggtcctgcgccggtcgtgctcgcccagcaggcgctcgaccttgcccgcacgatcgcgcca
tcgcttgcagggctgaacgacagctcttcgaagcgtgagttcgaagccgcgttgcacggg
tgcgagcagaagctcgatgagctgctctcttcctggtcggaaggcgccgacgaacgtttt
ctcggcatcctcggggcttttcccatgccgaaaaggacgttcgggaagggcgacaacccc
tatgccgcgcacgtgggcgaatgggcgcaggaactcgccgagatctgcctgaacgccctg
caggcttcggcgcggatccatttcgcgaccttgcgcggcctcgcatccgacgttctcgcc
gcattcgagcgcatcaagcgcgaggcctgcgttctcgacaacaccgacctcgtcacgaag
gcgcaccgcgcgcttgaagaccatccggccatagctcgagaatacgcgcatgcgttccgg
ctcgtcatgatcgatgagttccaggataccgaccagatgggcatcgacatggtcatgcgc
ctgtcggacggcggcgcgcgcctgtgcacggtcggcgacgcgcagcagagcatctaccga
ttccgcggcgcggacgtcggcgtgttccgcgcgcacgaggcgcgcatgcgtgcattggga
gatgcggcgatggtccgcaccttggatacgaactaccgcagcaacgccgatgtgctctcg
ttcgtcgactgcctgttttccgggcgcgcgatgttcggggcctcgttcatgtctctgcgc
cctggacgggacgaatcccgcatcgatgctccgtatcggggaagcgcgccccgcatccag
gtcgtgctggtgcagcgatccaagcctccgaaaggctcatccatcgactcctcatgcaag
accgccgtcgcggcggacgcgatcgcgcgccggttcgagcgcctgcgtgccgaagggcat
cgggcgcgggatatggtcgtgctgctcggccgcatgacgaacgccgatgcgttcgctcgc
gccctgagggggcgaggattcgaatgcgtcatcgccgggggatcgttgttcggcgaggcg
cccgagacccgggccgtcgtgagcctcgttcgggcgatcgcgaatcccaacgacgagacc
gcccttctcgatacgctcgagagcgatcttttcgccgtgggcgacgacgatatcctttcc
ctggtcacggaatgcagggaagacggatcgatcgcgcggcgcgcccttgcgcggggtttc
tgggatcttctggatcgcgagccgacggtcgggatatcgcagggactcgcgcatgcggcg
tccgtcctggacgcatgctgccgcatggccgaaatgtcgacggtcgaggacatccttctg
catgcgcttgcggcttcaggctggctggcgcgccttgaaagccaaggcgccgaaggcatc
gcacgtgcgggcaacgcgctcaaggccgtgcgtttcgcagccggcctcgctgccgagctc
ggctgcggcatcgccggcgtggcgtccgcgatgcccgatcgcatcgctcgagccaaggag
gctccgggcgcgctttcggccggagaaggcgatttcgtgcgcatcatgacggttcattcg
agcaaggggctcgagttccccatagtcgcggttgcggagatcggcaagggcaaggagccg
acgaacgaggcgttcctatcgacccgcatcaagggggtcacgtatgcgaccttgctgcct
cgaagcgcgttcctgccgaaggaactgaagaagaaggccgacacgttcgtgctgcccgag
gacgtccgagccgacgtcgatcggctcgtggcctcgtcggaaagccccgcctcccgtcgc
cgggcgaccgtcgcgcacgaaacggagcaggggcgtcaagaagcacagcgcctcatgtac
gtggcgctgacccgtgcgagcgaagccctcgtcctcgtcatggacgtcgacgacaatgcc
gcgcatgatatccgggcctatgcaccccttgacggcgccatcagggattcgatcatggga
ttcggcggcgatcccctcgcggattttccttcgggcgcctcgacgctgccgtatggagga
tcggaggatgcggcgttcgagaggatcgtcatcggcgtgaacgacgaagggggcgtcatc
gtcacgggaggagacggcgaagcttaccgttggggcgatgccgacgccgacgaaggggag
aagcgcgttttcgccatccccgaggccatgccctcgcgcatgccctccgttccgttcgga
cccgaaagagaaggcttcgaaagctatacctcgctttcgtccctggccggtgcgctcgat
gcgaacaagggaggcgcgtctgcgacggcccgcgaaggcgtgccttcgttcgacgaggca
tcggaggcggggatagatcctttcgcggacgatgcggaagaaggcgcgttcgggcgcgcg
ggcgcggcgttcgcgctcgacgaggacagggcgaccgacgtaggcgcggcgttccatgcg
cttgcccagtggtcggtcgaggaattcggatccgagctttcgtcccgtcgctgcgacgct
tcgcgccgcgaaggccttcctctgccgccgcccgatcgcatcgaggcgacggcacgggcc
ttcggcgtctcgtcgagcgccgcgccgcgcctggaggcggcctgcctccggtggacaggg
agcgcgtgcgcccgggaagcgatcgcgtggccgaacctgcatgccgaatatccgttcttc
atcccgatgggcgcgtcttccgacgggtctgaggaatgggtcctggaagggtcgatggat
ctgttttcgggagaggaggacggatcgtgcgcgcgcatcgtcgattacaagaccggcggg
cgattcgacgacgcgcccgaggatatcctcgaaaggcatcgcctgcaggcgacctgctac
gccttcgccgcgctgtcatccggctacgatcgcgtcgaggccacgttcgtctatgtcgaa
cagtcggattggcatcgagaaggggagccgcgatgcgtcgtctattccttcgacgcggca
gacctcgacggcatgcgcgacctgctcgaggccatccatgcgaggagggtctgcccatga
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