KEGG   Selenomonas sp. oral taxon 478: ADJ74_05040
Entry
ADJ74_05040       CDS       T04017                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
sele  Selenomonas sp. oral taxon 478
Pathway
sele00040  Pentose and glucuronate interconversions
sele01100  Metabolic pathways
sele02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sele00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    ADJ74_05040
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ADJ74_05040
Enzymes [BR:sele01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     ADJ74_05040
SSDB
Motif
Pfam: Pectate_lyase_4 DUF7174
Other DBs
NCBI-ProteinID: AKT53853
LinkDB
Position
1:1073092..1074360
AA seq 422 aa
MKKKILLIACITALAAVFLLPLVQSSMGKTDFIREVLAKNDGFAAEGSGTTGGAAAVEDN
IFRVTNRQEFIAALGNRKNTEPRILMIYGTIDFDTDADGKHLTMEDYMAEGYDFQQYLES
HAPHSTASQSKKEEQEEKRKQSQKNQEKNIMVHVPANTSIIGIEDAKLKGVDLVLDADNM
IIRNIMFESPYDYFPSWDPNDGPDGNWNSQYDCITIRGGTHIWIDHCHFEDGQQPTETYF
HREYEHRDGLVDITNQADDITMSYNVFERHNKAILIGNSDEKTSDDGKLNVTLHHNYFHN
LVQRVPRVRWGKVHVYNNYYQTDDENGAYRYAYSLGVGKNSKIYAENNVADIDGRTYQSF
VKVFGGTEFTAVNNVFNGEKIDTFNEHLSPVAWAPERYIKIDDVSAVKEKVLQHAGVLKN
ED
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaaaagaaaattttactgattgcctgtattactgcgttagcggccgttttcctcttg
ccgcttgtccagagctcgatggggaagacggattttatacgggaagtgcttgctaaaaat
gatggatttgccgcagagggcagcgggacaaccggcggggctgctgccgtagaggacaat
attttccgcgtgaccaataggcaggagtttattgccgcattggggaatcgcaaaaatacg
gaacctaggattttgatgatttatgggacgatcgacttcgatacggacgcggatggcaag
cacctgacgatggaagattatatggcggagggctatgattttcagcaatatctggagtca
catgcaccgcatagtactgcgtcgcaaagcaaaaaagaagagcaggaggaaaaaagaaaa
caatctcaaaagaatcaggaaaaaaacatcatggttcatgttcccgccaatacgagcatc
attgggattgaagatgcgaaattaaagggcgtggatctagtcctcgatgcggacaatatg
atcatccgaaatattatgtttgagtccccgtatgattatttcccgtcgtgggatccaaac
gatgggccggacggcaactggaattctcagtatgactgcattacgatccgtgggggcacg
catatttggatcgatcattgccatttcgaggatgggcagcagccgacggaaacgtatttt
catcgcgaatacgagcatcgagacggcttggtcgatatcacgaatcaggcggacgacatc
acgatgtcatacaatgtttttgaacgtcacaataaagcaatcttgatcgggaacagtgat
gaaaaaacgtcggacgatggcaaactgaatgtgacgctgcatcataactatttccataat
ttggttcagcgcgtaccgcgcgtgagatggggaaaggttcacgtgtataataattactac
caaacggacgatgaaaacggcgcataccgttatgcgtattcgttgggcgtcggaaaaaac
tcgaaaatatatgccgaaaataatgtcgcggatatcgacggcaggacgtatcaaagtttt
gtcaaggtgtttggcggaacggagtttactgcggtcaacaatgtttttaatggcgagaaa
atcgatacatttaacgagcatttatccccggtcgcgtgggcgcctgagcgatacataaaa
atcgacgatgtgagtgcggtgaaagaaaaagttttacagcatgcgggcgtgctaaaaaat
gaagattaa

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