Salmonella enterica subsp. enterica serovar Thompson: IA1_02260
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Entry
IA1_02260 CDS
T02868
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00900
Terpenoid backbone biosynthesis
sene01100
Metabolic pathways
sene01110
Biosynthesis of secondary metabolites
Module
sene_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
IA1_02260
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sene01006
]
IA1_02260
Enzymes [BR:
sene01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
IA1_02260
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
IA1_02260
Prenyltransferases [BR:
sene01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
IA1_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
AGX09689
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All DBs
Position
complement(499907..500806)
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AA seq
299 aa
AA seq
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MDFTQQLQACVTQANQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFG
VSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTL
AFAIISDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRH
KTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttacgcagcagctacaggcttgcgtaacgcaagcgaatcaggcgctgagccgt
tttatcgcgccactgccctttcagaacactcccgtggtcgaagccatgcagtatggcgca
ttattaggcggtaaacgcctgcggccatttctggtttacgccaccggtcaaatgtttggc
gtcagtacggcaacgctggatgcgccagctgcggcggtcgaatgcattcatgcctattcg
ctgatccatgacgacctgccagcgatggacgatgacgatttgcgtcgcggcctgccgact
tgccatattaaatttggcgaagccaacgcaatcctggcgggagacgcgttgcagacgctg
gcgtttgccattatcagcgacgcgccgatgccggaagtcaccgatcgcgatcgtatcgcg
atgatcgccgaactggcaaatgccagcggtatcgccggtatgtgcggcggtcaggcattg
gatctggcggcagaaggccagcggatcactctggacgcgctggaacgcattcatcgccat
aagaccggcgcgctcattcgcgccgccgttagacttggcgcgttgagcgcgggcgataaa
ggacggaatactctgccgatacttgaccgctatgcagagagtatcggccttgccttccag
gttcaggatgacattctggatgtggtgggcgatactgcaacgttaggtaaacgtcagggc
gcagaccagcagcttggcaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aataaagcccgggacctgatagaggacgcccgtcagtcgttacatcagctggccgcgcaa
tcactggacacctcggcactggaagcgctagcgaactacataatccagcgtgataaataa
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