Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_37231
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Entry
STMDT2_37231 CDS
T02869
Symbol
thdF
Name
(GenBank) thiophene and furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
senr03016
]
STMDT2_37231 (thdF)
Transfer RNA biogenesis [BR:
senr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
STMDT2_37231 (thdF)
Prokaryotic type
Methyltransferases
STMDT2_37231 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
AAA_28
Arf
Gtr1_RagA
SRPRB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CDG09878
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All DBs
Position
4006773..4008149
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AA seq
458 aa
AA seq
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MRLTMSHNDTIVAQATPPGRGGVGILRISGLKARDVAQEVLGKLPKPRYADYLPFKDVDG
SALDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAF
LNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDF
PDEEIDFLSDGKIEAQLNGVIADLDAVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNAL
AGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQA
DRVLFMVDGTTTDAVDPADIWPDFIARLPKNLPITVVRNKADITGETLGISEVNGHSLVR
LSARTGEGIDVLRNHLKQSMGFDTNMEGGFLARRRHLQALAEAAEHLEQGKAQLLGAWAG
ELLAEELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgagactaaccatgagccataacgacactatcgtcgcccaggcaaccccaccgggacgc
ggtggcgtgggtatcctgcgtatttccggtctgaaggcgcgcgacgttgcgcaagaggtg
ctgggcaagctgccgaagccgcgctatgccgactacctgccgtttaaagatgttgacggc
agcgcgctggatcagggtattgcgctgtggttccccggcccgaactccttcaccggtgaa
gatgtgctggagctacaagggcacggcggtccggtgattctggacctgctgttaaaacgt
atcctgacgcttccaggcgtgcgcattgcccgaccgggcgagttctccgagcgagcgttc
ctcaacgataagctcgatttagcccaggcggaagccattgccgacctgatcgatgccagt
tccgaacaggcggcgcgttcggcgctaaactcgttacagggggcattttccgcccgcgtt
aaccaccttgtggaagcacttactcacctgcgaatctacgtcgaagcggctattgatttt
ccggatgaggagatcgactttctctctgacggcaaaatcgaagcgcagctcaatggcgtc
atcgccgatcttgacgccgtgcgcaccgaagcgcgccagggcagcctgctgcgcgaaggg
atgaaggtagtgattgccggacgcccgaatgccgggaaatccagcctgctgaatgcgctg
gcaggccgtgaagcggccattgtcaccgatatcgccggtaccacgcgcgacgtgttgcgc
gagcatatccacatcgacgggatgccgctgcatatcatcgataccgccggactgcgcgac
gccagcgacgaagttgagcgtatcggcatcgaacgcgcctggcaggagattgaacaggcc
gatcgcgtgctgtttatggtggatggcaccacgacggacgccgttgaccctgccgacatc
tggccggactttatcgcccgtctgcccaaaaatctaccgattaccgtggtacgtaacaag
gcggatatcaccggcgaaacgttgggtattagtgaagtaaacggtcactcactggttcgc
ctctcggcgcgtaccggcgaaggcatcgacgtgttgcgtaaccacctcaagcaaagcatg
gggtttgataccaatatggaaggcggcttcctggcccgtcgccgtcacctacaggcgctg
gcggaagccgctgaacaccttgagcagggcaaagcgcagctattaggcgcatgggcgggg
gaactgctggcggaagagttgcgcctggcgcagcaaagcttaagcgagattaccggcgag
tttacctccgacgacctgctgggacggattttctccagcttctgtatcggtaagtaa
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