Staphylococcus epidermidis ATCC 12228: SE_0664
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Entry
SE_0664 CDS
T00110
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sep03400
]
SE_0664
Enzymes [BR:
sep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SE_0664
DNA repair and recombination proteins [BR:
sep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SE_0664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
CompInhib_SCIN
KxDL
GxGYxYP_N
Dna2
Motif
Other DBs
NCBI-ProteinID:
AAO04261
UniProt:
Q8CPT9
LinkDB
All DBs
Position
650575..654249
Genome browser
AA seq
1224 aa
AA seq
DB search
MKVVKDMIPTKPHDVIWTDAQWQSIYAKGQDILVAAAAGSGKTAVLVERIIQRILRDDVD
VDRLLVVTFTNLSAREMKHRVDKRIQEASFKDPNNEHLKNQRIKIHQAQISTLHSFCLKL
IQQHYDVLDIDPHFRTSSEAENILLLEQTIDDVLEQHYDKLDPHFIELTEQLSSDRNDDQ
FRSIIKQLYFFSIANPQPFEWLNQLAQPYKEENKQQQLMQLINDLAMIFMKAGYEELQKS
YDLFSMMESVDKQLEVIETERMFITKAIEGKVLNTDVITQHEFMSRFPAINSKIKEANEG
MEDALNEAKQHYDKYKSLVMKVKNDYFSRNAEDLQRDMQQLAPRVAYLAQIVQDVIQSFG
VQKRSRNILDFSDYEHFALCILTNEDGSPSRIAETYREHFKEILVDEYQDTNRVQEKILS
CIKTGEEHDGNLFMVGDVKQSIYKFRQADPSLFIEKYNRFSSSGNESGLRIDLSQNFRSR
QEVLSTTNYLFKHMMDEQVGEISYDDAAQLYFGAPYDEVSHPVQLRALVEASSENSDLTG
SEQEANYIVEQVKDIINHQNVYDMKTGQYRKATYKDIVILERSFGQARNLQQAFKNNDIP
FHVNSKEGYFEQTEVRLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEEELAEIRVVSPHD
DYFYQSIKNYMIDEKADSRLVDKLNRFIQDIQKYQNYSQSQPVYQLIDKFYNDHFVIQYF
SGLIGGKGRRANLYGLFNKAVEFENSSFRGLFQFIRFIDELIDRKKDFGEENVVGPNDNV
VRMMTIHSSKGLEFPFVIYSGLSKKFNKGDLNAPVILNQQYGLGMDYFDVNKDMAFPSLA
SVAYRAINEKELISEEMRLIYVALTRAKEQLILVGRVKDEKSLIKYEQLAVSDTHIAVNE
RLTATNPFVLIYGVLAKHQSPSLPNDQRFERDIDQLNSEVKPRVSIVIDHYEDVSTEEVV
NDNEIRTIEELKAINTGNEDVKIKIHQQLSYDYPFKVNTMKPSKQSVSELKRQLETEESN
TNYDRVRQYRIGVASYERPKFLTQTKKRKANEIGTLMHTVMQHLPFREQRLTKDELFQYI
DRLIDKQLIDEDAKEDIRIDEIMHFIDGPLYMEIAQADNVYTELPFVVNQIKVDGLTSED
EDVSIIQGMIDLIYESDGQFYFVDYKTDAFNRRKGMSDEEIGNQLKEKYQIQMTYYRNTL
ETILKRPVKGYLYFFKFGTLEIDD
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtgaaagacatgattccaactaaacctcatgatgtgatttggacagatgca
caatggcaaagtatttatgcgaaaggacaggacatacttgttgctgctgcagcaggttcc
ggtaaaacagccgttctagttgagcgtattatacaacgtatactaagagatgatgtagat
gtagatcggttactagttgtaacatttacgaatttaagcgcacgtgagatgaagcatcga
gttgataaacgtatacaagaagcatcttttaaggatcctaacaatgaacatttaaagaat
cagcgaatcaaaattcatcaagcacagatttctactttacacagtttctgtttgaaattg
attcagcagcattatgatgtattagatatcgatcctcattttagaacaagtagtgaagcg
gaaaatatattattattagaacaaactattgatgatgttttagaacaacactatgataaa
ttagatcctcactttatagaattaaccgaacaactatcatcagataggaatgatgatcaa
tttagaagtattattaagcagttatattttttcagtattgctaatcctcaaccatttgaa
tggctcaatcaattagcgcaaccatacaaagaagaaaataaacagcaacaattaatgcag
cttatcaatgatttagcaatgatttttatgaaagcaggatatgaggaattacaaaaaagt
tatgacttattctcaatgatggaaagtgttgataagcagcttgaagttattgaaaccgaa
cgcatgtttattactaaagctattgaaggtaaagtattaaatacagatgttatcacgcaa
catgaatttatgagtcgttttccggcaataaatagcaagataaaagaagcaaatgaaggc
atggaagatgctttaaatgaagcaaaacaacattatgataaatataaatctttagttatg
aaagtaaagaatgattatttttctagaaatgcagaagatttgcaaagagatatgcaacaa
ctcgcacctcgagtggcttatttagctcaaatagttcaagatgtgattcaatcatttggt
gttcaaaaacgaagtcgtaatattttggatttttcagattatgaacattttgcattatgc
attcttactaacgaagatggctcaccttcgcgtatcgctgaaacgtatcgtgaacatttt
aaagaaatcctagttgatgagtatcaagatactaatagagtgcaagaaaaaatattatct
tgtattaaaactggtgaagaacacgatggtaacttgttcatggttggggatgtgaagcag
tctatttataaatttagacaagctgatcctagtttatttattgaaaaatataatcgcttt
tctagtagtggaaatgaaagtggcttgcgcattgacttatcgcaaaactttcgttcgaga
caggaagtgttatctacaaccaattacttgttcaaacatatgatggatgaacaagtagga
gaaatttcatatgatgatgcagcacaattgtattttggtgcaccatatgacgaagtttca
catcctgttcaattacgagcacttgttgaggcaagttcagaaaatagtgacttaactgga
agtgaacaagaagcgaattacattgttgaacaagttaaagatattattaatcatcaaaac
gtatacgatatgaaaacaggtcaatacagaaaagcaacatataaagatatcgtaatttta
gagcgaagttttggtcaagcgcgtaatcttcaacaagcttttaaaaataatgatatccct
tttcacgtaaatagtaaggaagggtattttgagcaaactgaagtacgtcttgtgctttca
tttttaagaacaatagataatccacttcaagacatttatttagtgggattgatgcgttct
gtaatatatcaatttactgaagaagaattagctgaaataagagttgtaagccctcatgat
gattacttttatcaatctataaaaaattatatgattgatgaaaaagctgattctagattg
gttgacaagttaaatcgttttattcaggatatacaaaaatatcaaaattatagtcaaagt
caaccggtttaccaattaattgataaattttataatgatcattttgtaattcagtacttt
agcggtcttattggaggtaaaggtagaagagcaaatctgtatgggctatttaataaagct
gttgaatttgaaaattcaagtttcagaggtttattccaatttattcgttttattgatgag
cttattgatcgtaaaaaagattttggtgaagaaaatgtcgtaggtcctaacgataatgtg
gttagaatgatgacgattcacagtagtaaaggattagaatttccatttgtaatttactca
ggattatctaaaaaattcaacaaaggtgacctgaatgcaccagttattctaaatcaacaa
tatggtttaggtatggattattttgatgtaaataaagatatggcttttccttcacttgcc
tctgtggcatatagagcaataaatgaaaaagaacttatatcagaagagatgcgtttaatc
tatgttgcgttgacacgagcaaaagagcaacttattttagttggaagagtcaaagatgaa
aagtcgttaattaaatatgaacaattagctgtttcagacacacatatagcagttaatgaa
cgccttactgctaccaatccatttgttctaatttatggtgttttggctaagcatcaatcg
ccttcattgccaaatgatcaaagatttgaaagagatattgatcaattaaattctgaagtg
aagccacgtgtatcaatagtgattgatcattatgaggatgtttcaactgaagaagtagtc
aatgataatgaaataagaacaatcgaagaattaaaggccataaatactggtaatgaagat
gtgaaaattaaaattcatcaacagctttcttatgactatccttttaaagttaacacgatg
aaaccatctaaacagtcggtatcagagttaaaacgtcaattagaaactgaagaaagtaat
acaaattatgatagagtacgtcaatatcgtattggtgttgcatcatatgaaagacccaag
tttcttacccaaacaaaaaaaagaaaagcaaatgaaatagggactttaatgcatacagtc
atgcaacacttaccttttagagaacaacgtttaacaaaagacgaattatttcaatatatc
gatcgattgattgacaaacaacttattgatgaagatgcaaaagaggatattagaatagat
gagattatgcatttcattgatggccctctctatatggaaatagctcaagctgacaatgtt
tatactgaattaccttttgtggtaaatcaaattaaagttgatggacttacaagtgaagat
gaagatgtatccattattcaaggtatgattgatttaatatatgaaagtgacggacaattt
tactttgttgattacaaaacagatgcttttaatagaagaaaaggtatgagtgatgaagaa
atagggaatcagctcaaagaaaaatatcagatacaaatgacgtattatcgaaatacttta
gaaaccatacttaaacgacccgtaaagggttacttatattttttcaaatttggtacatta
gaaatagatgattaa
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