Staphylococcus epidermidis PM221: SEB_02407
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Entry
SEB_02407 CDS
T03289
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
sepp
Staphylococcus epidermidis PM221
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sepp03016
]
SEB_02407
03036 Chromosome and associated proteins [BR:
sepp03036
]
SEB_02407
Transfer RNA biogenesis [BR:
sepp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SEB_02407
Prokaryotic type
SEB_02407
Chromosome and associated proteins [BR:
sepp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SEB_02407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_binding_2
Pyr_redox_2
FAD_oxidored
HI0933_like
DUF1779
Thi4
AlaDh_PNT_C
DUF1828
Motif
Other DBs
NCBI-ProteinID:
CDM14939
LinkDB
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Position
complement(2485157..2487034)
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AA seq
625 aa
AA seq
DB search
MVQEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE
IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQ
GMVDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVT
LADNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPCW
LTYTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN
TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIK
NLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTN
EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDV
RIKPNEHTQAIIEAKGGSRLKDGILAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEI
QTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRI
SGVNPADISILLVYLEQGKLQRVKQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtggttcaagaatatgatgtagtagtcattggtgctggtcacgccggtattgaagcaggt
ttagcttcagctcgtcggggtgctaaaacgctgatgttaacaattaatttagataatatt
gctttcatgccatgtaatccatctgtaggtggtcctgcgaaaggaatcgttgtacgtgaa
atagacgctttaggtggacaaatggcaaaaactattgataaaactcacattcaaatgcgt
atgcttaatacaggtaaaggtccagctgttagagctttacgtgctcaagcagataaagta
ttatatcaacaagaaatgaagcgtgtacttgagaatgaggataatttagacatcatgcaa
ggtatggttgatgaactcattatagaagataatgaagttaaaggtgttcgtactaatatt
ggtacagaatatcgttctaaagctgtcattattacaacaggtacattcttacgtggagaa
attatactaggaaacttaaaatattctagtggccctaaccatcaattaccatctgtaact
ctagcagataatttaagaaaattaggatttgatatcgttagatttaaaacgggtacacca
ccacgtgtaaatgcgagaaccatcgattattctaaaactgaaatccaaccaggtgatgat
ataggtcgagcgtttagttttgaaacaaccgaatttattttagatcaattaccttgttgg
ttaacttatacaaatggagatacacatcaagtcattgatgataacttacatttatctgct
atgtattccggtatgattaaaggtacaggtcctagatattgtccatcaattgaggataaa
tttgtccgctttaacgataaaccaagacatcaacttttcttagaacctgaaggacgtaat
acgaatgaggtatacgtgcaaggattatctactagtttacctgaacatgttcaacgtcaa
atgttagaaaccattccaggtcttgaaaaagcagatatgatgcgtgcgggttatgctatt
gaatatgatgcaatcgtgcctactcaattatggccaacgttagaaacaaaagcgatcaaa
aacttgtatactgcaggtcagattaatggaacatcaggatatgaagaagcagcgggacaa
ggaatcatggcaggtattaacgctgctggtaatgttttaggtacaggtgaaaaaatactc
agccgttcagacgcatatattggtgtacttatagatgatttagtcactaagggtacaaat
gaaccgtatcgattattaacttcacgtgcggaatatcgattattactacgtcatgataat
gctgatttacgtcttactgatatggggtatgaattaggtttaatatcagaagaacgctat
gcaagatttaatgaaaaacgtcaacaaatcaaagatgaaatacaacgacttaccgatgta
cgtattaaaccaaatgaacatacgcaagcaattattgaagctaagggtggttcaagatta
aaagatggcatattagcgattgatttattacgtcgtccggaaatgaactacgaaacaatt
ttagaaatcttagaagaatcacatcaacttcctgaagcggttgaggaacaagttgaaatt
caaacaaaatatgaaggttatatcaataaatctttacaacaagtagaaaaagttaaaaga
atggaagcgaaaaaaattcctgaggatttagattatagcaaggtagatagtttagcatct
gaagcacgcgaaaagttagctgaagttaaaccattaaatattgcacaggcttcacgaatt
tcaggtgtgaatccagcagatatctcaattctacttgtttatttagaacaaggtaaactt
caaagggtgaaacaataa
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