Staphylococcus epidermidis SEI: DP17_262
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Entry
DP17_262 CDS
T03343
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DP17_262 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seps03016
]
DP17_262 (trmU)
Enzymes [BR:
seps01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
DP17_262 (trmU)
Transfer RNA biogenesis [BR:
seps03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
DP17_262 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ATP_bind_3
QueC
ThiI
Arginosuc_synth
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
AIR81929
LinkDB
All DBs
Position
complement(287511..288629)
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AA seq
372 aa
AA seq
DB search
MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIA
VCNQIGIPYYAVNFEEQYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHALKLGA
DYVATGHYARIRRHDDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDIEKSEVRR
IAEEQNLATAKKKDSTGICFIGERNFKEFLSQYLPAQSGEMLTLNGKKMGQHSGLMYYTI
GQRHGLGIGGDGDPWFVVGKNLNDNVLYVEQGFHHDALYSDYLIASDYSFVNPSEIDLEK
GFECTAKFRYRQKDTKVYVQRENENSIRVTFAEPVRAITPGQAVVFYNQEVCLGGATIDD
VYKNEGQLSYVV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaacaaagatatacgcgtagttgtgggcatgtctggtggagtggatagctctgtt
actgcatacttgttaaaagaacaaggttatgatgtaataggtatatttatgaaaaattgg
gacgatactgatgaaaatggggtgtgtacagccactgaggattataatgacgtgattgca
gtatgtaatcaaattggcattccatactacgctgttaattttgaagaacagtattgggat
aaagtatttacttattttcttgatgaatataaaaaaggtcgtacacctaaccctgatgtg
atgtgtaataaagaaattaaatttaaagcatttttagaacatgctttaaaattaggcgct
gattatgtcgctacaggtcattatgcacgtatacgtcgtcatgatgatgggcatgttgaa
atgctaagaggtgttgacaataataaagaccaaacctactttttaaatcaattatcccaa
gaacaactatccaaagtcatgttcccaattggagatattgaaaaaagtgaagtaagacgt
attgcagaagagcaaaatttagctactgccaagaaaaaagactcaacaggtatttgtttt
atcggtgaaagaaactttaaagaatttttatcacaatacttaccagctcaatctggtgaa
atgttgacattaaacggaaaaaaaatgggacagcatagtggattgatgtattatacaatt
ggtcaacgtcacggcttaggcatcggtggagatggagatccatggtttgttgtaggtaaa
aatttaaatgataacgtattatatgttgaacagggatttcaccatgatgcactttatagt
gattatctcatagcttctgattattcatttgttaatccaagtgaaattgatttggaaaaa
ggttttgaatgtacagctaaattccgttatcgccaaaaagatactaaagtttatgttcaa
cgcgaaaacgagaattctattagagtaacttttgctgaaccagttagagcgattacacct
ggtcaagcagttgtcttctataatcaagaagtatgtttaggtggcgctacaattgatgat
gtttataaaaacgaaggtcaattaagttacgttgtataa
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