Staphylococcus epidermidis RP62A (MRSE): SERP1805
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Entry
SERP1805 CDS
T00229
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Pathway
ser03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERP1805 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ser03021
]
SERP1805 (rpoA)
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP1805 (rpoA)
Enzymes [BR:
ser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SERP1805 (rpoA)
Transcription machinery [BR:
ser03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SERP1805 (rpoA)
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SERP1805 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF961
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AAW55198
UniProt:
Q5HM25
LinkDB
All DBs
Position
complement(1848886..1849830)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEVSEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAVDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKVRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVSLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaacctagaattgagacaattgaagttagtgaagatgctaaattc
ggtaaattcgttgttgaaccacttgaacgtggctatggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaagtacatcgagattgaagga
gttttacacgaattttcagcagtagataatgtagtagaagatgtttcaacaatcattatg
aacattaaaaaacttgcattaaaaatttactctgaagaagataaaactttagaaattgat
gttaaagatgaaggcgaagtaactgcaagtgacattactcacgacagtgatgttgagatt
ttaaatccagagcttaaaatcgcaacagtgtctaaaggtggacatcttaaagtgcgtctt
gttgctaataagggtagaggttacgcattagctgaacaaaataatactagtgatttacca
attggtgtaattcctgttgattcactatattcacctgttgaacgtgtaaactatacagtt
gaaaatacacgcgtaggtcaaagtagtgattttgataaattaactttagatgtttggaca
aatggttcaatcacaccacaagagtcagtatcattagcagctaaaataatgactgaacac
ttgaatatctttgtaagtctaactgatgaggctcaaaacgctgaaatcatgattgaaaaa
gaagaagatcaaaaagaaaaagtacttgaaatgtctattgaagaattagacttatctgta
cgttcttataactgcttaaaacgcgcaggaatcaattctgtacaagagttagctgataaa
tctgaagctgacatgatgaaagtgcgtaatttaggtcgtaaatctctagaagaagtaaaa
tataaattagaagatttaggattaggattaagaaaagaagattga
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