Prodigiosinella confusarubida ATCC 39006: Ser39006_020580
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Entry
Ser39006_020580 CDS
T05290
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00250
Alanine, aspartate and glutamate metabolism
sera00410
beta-Alanine metabolism
sera00430
Taurine and hypotaurine metabolism
sera00650
Butanoate metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera02024
Quorum sensing
Module
sera_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Ser39006_020580
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ser39006_020580
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Ser39006_020580
00430 Taurine and hypotaurine metabolism
Ser39006_020580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_020580
Enzymes [BR:
sera01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Ser39006_020580
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AUH06297
UniProt:
A0A2I5TBQ1
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All DBs
Position
complement(4507950..4509332)
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AA seq
460 aa
AA seq
DB search
MPIHHVDLNNQSSRLDIYATKASQDSLPKYQLPKGRTEPRAAYALVRDELLLDGNARQNL
ATFCTTWVEDEVKQLMTDSIDKNMIDKDEYPQTAEIENRCVHIIADLWHANKSRKTVGCS
TTGSSEAAMLGGLAFKWAWRKRREAAGKDTSKPNIVTGPVQICWKKFARYFDVEIREVPL
EGDALGLKPEDLRQYCDENTIGVVATLGVTFTGIYEPVEALAKELDAMQRDLGLDIPIHV
DAASGGFIAPFIQRDLVWDFQLERVKSINASGHKYGLAPLGVGWVIWASQEDLPEELIFY
VDYLGGNMATFALNFSRPGGEIIAQYYNFLRLGREGYTAVQQACSDTAQWLGEKLAALEC
FEMVYDGHGGLPAVAYKLTDTVQGFTLYDLSERVRMGGWQIASYPLPMNRQETVVQRILI
RHGVSRDLAQLLLDDITRSIDHLTKNPILNSTAKPGFHHG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccatcacgttgacttaaataaccagtccagccggttggatatttatgccacg
aaagcctcacaagacagcctccccaagtatcagcttccaaaaggtcgtactgaacctcgc
gccgcctatgcgctcgttcgggatgaacttttgctggatgggaatgcccgccagaacctc
gcaaccttctgcaccacgtgggtggaggacgaggtcaagcaactcatgaccgactcgatc
gacaaaaacatgatcgacaaagatgagtacccccaaacagccgaaatcgaaaatcgctgt
gtccacatcattgctgatctctggcacgcgaataaatctcggaaaacggtggggtgttca
acgaccggatcaagcgaggcggccatgctgggcggcctggcgttcaagtgggcatggcgt
aagcgccgggaagcagcaggtaaggatacgagcaagccaaacatcgtgacgggtccggtg
cagatctgttggaagaaattcgctcggtatttcgatgttgagatccgtgaggtgccactg
gaaggggacgcccttggtttgaaacctgaagacctgcgccagtattgcgacgaaaacacg
atcggtgtcgtggcgacgctgggtgtcaccttcaccggtatctatgaacccgttgaggcg
ctggcgaaggaactcgatgcaatgcagcgcgacctcgggctcgatattcctatccacgtg
gatgcggcgtccggcggattcatcgctcctttcattcagcgcgaccttgtctgggatttc
cagctagaacgcgtcaaatctattaacgcttctggccacaaatatggcctggcccccctt
ggtgtgggctgggtgatctgggcatcccaggaagacctgcccgaagagctgatcttctac
gtggattacctcggtggcaacatggccacattcgcgttgaacttctcgcgccccggcggt
gagatcatcgcgcaatattacaactttctgcgccttggtcgcgagggctataccgcggtc
cagcaagcctgctctgataccgcccaatggctgggtgaaaagttggcggcgctcgagtgt
tttgagatggtctatgatggtcatggcggtcttcccgcggttgcctacaagctaaccgat
acggttcaaggctttacgctttacgatctgtcggaacgggtacggatgggcggatggcag
atcgcctcctatccactgccaatgaaccgtcaggaaacggtcgttcaacgcatcctgatc
cgccatggggttagtcgggatctggcgcaactgcttctcgacgatatcacgcgatcgatc
gatcacctcacgaagaacccgattctgaactctacggcgaagccggggttccatcatggc
tga
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