Serratia sp. FS14: L085_20255
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Entry
L085_20255 CDS
T03313
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serf03009
]
L085_20255 (rumB)
Enzymes [BR:
serf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
L085_20255 (rumB)
Ribosome biogenesis [BR:
serf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L085_20255 (rumB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_12
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AIA49452
LinkDB
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Position
complement(4403269..4404399)
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AA seq
376 aa
AA seq
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MHCALYTAGTCRSCQWLEKPYPQQLADKQHHLQSLLAGRDVAQWLQPVAGELSAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLSDCPLYPAGFAPMFAVLKSFIARAGLTPYNVARKRG
ELKYLLLTESTLDGGVMLRFVLRSETKLAQLRAALPWLQQQLPQLRVISANIQPVHMAIM
EGEREIALTEQQALEEQFNQVPLFIRPQSFFQTNPQVAADLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPQTRLTGIEISAEAIACARQSAQRLGLLQVDFQALDSTRFATAEGQV
PQLVLVNPPRRGIGQALCDYLSRMAPDYILYSSCNAESMAKDIEMLPGYRIERVQLFDMF
PHTSHYEVLTLLVRIL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcgggcacctgccgttcctgtcagtggctggaaaagccc
tatccgcagcaactggccgacaaacagcatcacctgcaatcgctgctggccgggcgcgac
gtcgcgcagtggctgcagccggtggcgggggaactgagcgcatttcgcaataaagccaag
atggtggtcagcggcagcgtggagcgaccgctgctcggcatgctgcaccgcgacggcacg
ccggtcgatctgagcgactgcccgctgtaccccgccggctttgcgccgatgtttgctgtg
ctgaaaagctttatcgcccgcgccggcctgacgccgtataacgtggcgcgcaaacgtggc
gagctgaaatacctgctgctgaccgaaagcacgctcgacggcggcgtgatgctgcgtttc
gtgctgcgctcggaaaccaaactggcacagctgcgcgccgcgctgccgtggctgcagcag
cagctgccgcagctcagggtgatctccgccaatattcaaccggtgcatatggcgatcatg
gaaggggagcgcgagatcgcgctgaccgaacagcaggcgctggaggaacagttcaatcag
gtgccgctgttcatccgcccgcaaagcttctttcagaccaacccgcaggtggccgccgat
ctgtatgccaccgcccgcgactgggtgcgcgcgctgggtatcgacagcatgtgggatctg
ttctgcggcgtcggcggtttcggcctgcactgcgcgcagccgcagacgcgcctgaccggc
atcgaaatcagcgcggaggcgatcgcctgtgcgcgccagtcggcgcagcggttagggttg
ttgcaggtagattttcaagcgctcgattccacccgcttcgccaccgccgaaggccaggtg
ccgcagctggtgctggtcaatccgccgcggcgcggcatcggccaggcgctgtgcgactat
ttgagccggatggcgccggactatattctgtattcgagctgcaacgccgagagcatggcg
aaagatatcgagatgttgccggggtatcgcatcgaacgggtgcagctgttcgacatgttc
ccgcatacctcgcactacgaagtgctgacgctgctggtgcggattttataa
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