Serratia sp. MYb239: CLM71_04835
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Entry
CLM71_04835 CDS
T05477
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00900
Terpenoid backbone biosynthesis
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
Module
serm_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLM71_04835
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
serm01006
]
CLM71_04835
Enzymes [BR:
serm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CLM71_04835
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CLM71_04835
Prenyltransferases [BR:
serm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CLM71_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AVJ16507
LinkDB
All DBs
Position
complement(1031936..1032838)
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AA seq
300 aa
AA seq
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MSDFNSQLQSYRQRADRALLDFIAPLPFNDGRLVAAMRYGALLGGKRLRPFLVYATGEMF
GVPSDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHLKFDEASAILAGDALQT
LAFSILADAEMPDVAMRDRLAMVSELAGASGVAGMCGGQALDLAAEDRQINLEELEQIHR
HKTGALIRSAVRLGALAAGEPGRAALAELDRYAAAIGLAFQVQDDILDVIGDTAKIGKRQ
GADQQHGKSTYPALLGLDNARAKARDLYQEALSALDTLAAQSYNTASLRALASFIIERDN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcaacagccagctacaaagctatcgtcagcgcgccgatcgcgccctgctg
gactttatcgccccgctgccgtttaacgacggccggttggtggcagccatgcgctatggc
gccctgctgggcggtaagcgtctgcgcccgttcctggtgtatgccaccggcgagatgttc
ggcgtgccgtcggacaacctcgatgcgccggcggcggcggtagaatgtatccacgcctat
tctttgatccatgacgatctgccggcgatggacgacgacgacctgcgccgtggccagcct
acctgccacctcaaatttgatgaagccagtgcgattctggccggcgatgcgctgcagacg
ctggccttctccattctggccgacgccgagatgccggatgtcgcaatgcgcgaccgcctg
gcgatggtgtcggaactggccggcgccagcggcgtggccggcatgtgtggcggtcaggcc
ttggatcttgctgcagaagaccgtcagattaatctggaagaactggagcaaattcaccgc
cacaaaaccggtgcgctgatccgctcagccgtgcgtctgggcgcgctggcggcgggcgag
ccggggcgtgcggcgctggccgaactggatcgctacgcggcggccatcggcctggcgttt
caggttcaggatgacattctcgacgtcatcggcgacactgcaaaaataggaaaacgccaa
ggcgccgatcagcaacacggaaaaagcacctatcccgcgctgctgggcctggacaatgcc
agggccaaagcccgggatctgtatcaggaagccttgagcgctctggatacgctggcggcg
caatcatacaacaccgcatcattgcgcgcgttggccagctttattattgaacgcgacaat
taa
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