Serratia sp. NGAS9: GUC32_18255
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Entry
GUC32_18255 CDS
T10949
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sern Serratia sp. NGAS9
Pathway
sern03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GUC32_18255 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sern03000
]
GUC32_18255 (alkA)
03400 DNA repair and recombination proteins [BR:
sern03400
]
GUC32_18255 (alkA)
Enzymes [BR:
sern01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GUC32_18255 (alkA)
Transcription factors [BR:
sern03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GUC32_18255 (alkA)
DNA repair and recombination proteins [BR:
sern03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GUC32_18255 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QHI79409
LinkDB
All DBs
Position
complement(3846708..3848198)
Genome browser
AA seq
496 aa
AA seq
DB search
MQKKPNPSVAMNTQQQALYDALRARDRKFDGRFFVGVSSTGIYCRPVCSARTPKRENCTF
YPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCEALAARL
GISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLADTDLPLSEVAFAAGFGSLRRFNEL
FKARYRLIPSALRSGGARGERAAASGLVFHLGYRPPYDWARMLNFLQARAVQGVERVEGR
RYLRSIAVSQGGTEHRGWLSVQPEEARNRVRVEIAPTLSLVTTEVLRRVRLLFDLDAAPD
RINEALGSLAADAPGLRLPGCVNSFEQATRAVLGQLVSVKMAATFAGRMAERWGEALATP
HEGITHVFPTAERVAQLQPEELRPLGVQVKRAAALIEIARALGEGRLQLDNVLDIEQGIK
ALTALPGIGNWTASYIAMRAWSWPDVFLAGDYLIKQRFPGMTPRQIERYAERWRPWRSYA
TLHLWHNGGWAPEGES
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaaccgaacccgagcgttgccatgaatactcaacagcaagcgttgtacgac
gcgctgcgcgcgcgtgaccgcaaattcgacggccgttttttcgtcggcgtctcttccacc
ggcatctattgtcgcccggtgtgcagcgcccgcacgccgaagcgggaaaactgcaccttt
tatccgagcgcggcggcggctgaactggcggggtttcgcccctgcctcaaatgccgaccg
gaactggcgcccggcctggcgctgatcgatctgggcaaccgctatgcccaggtggcggtg
cagctcatcgagcaggggtatctgtccgaacacagctgcgaagcgctggcggcgcggctg
ggcatttccgatcgccatctgcggcgcatcttcgccgaacagtttggcgcctcgccgatc
gattacgcgcagtcgcaccggctgctgcaggccaagcgcctgctggcggacaccgatctg
ccgctcagcgaagtggcgttcgccgccggtttcggcagcctgcggcgtttcaatgagctg
ttcaaggcgcgttaccgcctgatcccgtcggcgctgcgcagcggcggcgcgcgcggtgaa
cgggcggccgccagcgggttggtgtttcacctgggctatcggccgccctatgactgggcg
cgcatgctgaatttcttgcaggcgcgcgccgtacagggcgtggagcgggtcgaggggcgc
cgctacctgcgctcgatcgccgtcagccagggcggcacggagcaccgcggctggctcagc
gtgcagccggaagaggcgcgcaatcgggttcgggtcgagatcgcgccgacgctcagtctg
gtgacgacggaggtgttgcgccgggtccgcttgctgtttgatctggacgccgcgccggat
cgcattaatgaggcgctgggctcgctggcggccgatgcgccgggattgcgcctgccgggc
tgcgtgaacagtttcgagcaggcgacgcgtgcggtgctggggcaactggtcagcgtgaaa
atggcggcgaccttcgccgggcggatggccgaacgttggggcgaagcgctggcgacgccg
catgagggcatcacccacgttttccccaccgcagaacgggtggcgcagctgcagcccgaa
gaactgcgcccgctcggggtgcaggtgaagcgtgcggcggcgctgatcgagattgcccgc
gcgttgggcgaagggcggctgcagctcgacaacgtgctggatatcgaacagggcatcaag
gcgctgaccgcgctgccgggtatcggcaactggaccgccagctatatcgcgatgcgcgcc
tggtcgtggccggacgtgttcctggccggcgactacctgatcaaacagcgtttccctggc
atgacgccgcgccagattgaacgctacgccgagcgctggcgcccgtggcgctcttacgcc
acgctgcacctgtggcacaacggcggctgggcgccggaaggggagagttga
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