Prodigiosinella confusarubida ATCC 39006: CWC46_20780
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Entry
CWC46_20780 CDS
T05968
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00061
Fatty acid biosynthesis
serq00071
Fatty acid degradation
serq01100
Metabolic pathways
serq01212
Fatty acid metabolism
serq02024
Quorum sensing
Module
serq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CWC46_20780
00071 Fatty acid degradation
CWC46_20780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWC46_20780
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
serq01004
]
CWC46_20780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serq04147
]
CWC46_20780
Enzymes [BR:
serq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CWC46_20780
Lipid biosynthesis proteins [BR:
serq01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
CWC46_20780
Exosome [BR:
serq04147
]
Exosomal proteins
Exosomal proteins of breast milk
CWC46_20780
Exosomal proteins of breast cancer cells
CWC46_20780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AUH02010
UniProt:
A0A2I5TBQ8
LinkDB
All DBs
Position
complement(4557809..4559287)
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AA seq
492 aa
AA seq
DB search
MISTKMQNFLHETEDRIVIREMNGKTHYHSELRRDVEDIAAGLNQIYGSCDRLVFGIAMR
SCYEWVTTLLAIQKVGAVLLPVPIEFSDEQISSLLTKASAIFVADDATRQRIDSIFPGKP
CFYPYQVKVHSQTLRLSGEERISDGVTAIIHTSGTTSKPKGVMIRDAAVGLLVDNVMKRL
PNRPLHYFSLVPMSLLIEQVLGIFIPLLSGGTLTLMPPGIKEYGSASGNAALYLGMIAEV
EPDFLYLPPKLLEEALALIEMDGSENVLGRNNPHIITGGAKIPVSVLQALDDKGVAVYEA
YGLSENSSIISLNYPGCRRIGSVGKLLDGITPLLVEGELLVKTPTLCAGYYNSDETSCDM
TDGYLHTGDITHFEDGYLYITGRKKHVIILSTARNVSPEWVETIYKESEIIEDMIVIGEG
QEQLGAIILSPHPESDVQRALESKNNRLAEFARVGKYAVVNNIAGFRRKYYTVTGRPRRK
EIEEDYSEIVYQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtacgaaaatgcagaattttcttcatgaaacggaagatcgcatcgttattcgt
gaaatgaatggcaagacccattatcactctgaacttcgtcgtgacgttgaagatattgcg
gcgggattaaatcagatctatggatcgtgtgaccgcctggtattcggtatcgccatgcgt
tcatgttatgaatgggttaccactttattggcgattcaaaaagtcggtgcggtcttgctg
ccggtgcctatcgaattttctgacgaacagatatcgagcctgctcaccaaggcaagtgcg
atttttgttgccgatgatgcgaccaggcagcgcattgactctatattccccggtaaaccc
tgtttctacccctatcaggtgaaagttcattcgcaaactttgcgattatcgggagaagaa
cgaatcagtgatggtgtgaccgctatcatccatacctccggtacaacgtcgaaacccaaa
ggcgttatgatcagagatgcagcagtggggttgttggtagataacgtaatgaaaaggctg
ccgaataggcctttgcattatttctcccttgttcccatgagtttactgatagagcaagtt
ctgggtatttttattcctttactgtctggtggtacgctcacattaatgccgccaggtatt
aaggaatatggctccgcgtcaggaaacgcagcactctatttagggatgatcgctgaagtc
gaacctgattttctgtatctaccgccgaaattactggaagaggcactcgcgcttattgag
atggatggcagtgaaaatgtgctggggcgtaataatccacatattattactggtggtgcc
aaaattccggtatctgtgttgcaggcgttggacgataaaggggttgctgtatacgaagcc
tatggactcagtgaaaacagttccattatttcattgaattaccctggttgccggagaatt
ggttcggtgggtaaattgttggatggtattacccccttattggttgagggtgaattactg
gttaaaacgcctacgttatgtgcgggatattataattctgacgagacctcttgcgacatg
actgatggttatcttcatacgggagatattactcattttgaggatggctatttatatatt
accggtaggaagaaacatgtaattattctttctaccgccagaaatgtttcccctgaatgg
gtggaaacaatatataaagaaagtgaaattattgaggatatgattgttattggtgaaggg
caggaacaattaggtgccattattctcagccctcatcctgaatcagatgtccagcgtgca
ttagaatcaaaaaataatcgtctggccgaattcgcccgagttggaaagtatgcggtagtt
aataatattgctggttttagaagaaagtattataccgtgactgggcggccaagaagaaaa
gagattgaagaggactattctgagatagtctatcagtga
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