Serratia sp. SCBI: SERRSCBI_21670
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Entry
SERRSCBI_21670 CDS
T03314
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERRSCBI_21670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sers03021
]
SERRSCBI_21670
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_21670
Enzymes [BR:
sers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SERRSCBI_21670
Transcription machinery [BR:
sers03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SERRSCBI_21670
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SERRSCBI_21670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AIM23890
LinkDB
All DBs
Position
complement(4654061..4655050)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagacgaagttattctt
accctgaataaatctggcattggccctgtgaccgctgccgacatcacccatgatggtgat
gtcgaaatcgtcaagcctcagcacgtgatctgccacctgactgatgagaacgcggctatc
agcatgcgtatcaaagttcagcgcggtcgcggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggtcgtctgttggttgacgcctgctacagccctgta
gagcgtatcgcctacaatgttgaagctgcgcgtgtagaacagcgtactgacttggataag
ctggtcatcgagatggagaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gccaccattctggctgaacaacttgaagctttcgttgacctgcgtgatgtacgtcagccg
gaagttaaagaagagaaaccggaattcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccaaacctgggtaaaaaatctctt
accgagattaaagacgtgctggcctcacgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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