Serratia sp. SCBI: SERRSCBI_23415
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Entry
SERRSCBI_23415 CDS
T03314
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sers03016
]
SERRSCBI_23415
03036 Chromosome and associated proteins [BR:
sers03036
]
SERRSCBI_23415
Transfer RNA biogenesis [BR:
sers03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SERRSCBI_23415
Prokaryotic type
SERRSCBI_23415
Chromosome and associated proteins [BR:
sers03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SERRSCBI_23415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_2
DAO
AlaDh_PNT_C
Thi4
Pyr_redox
Rab5-bind
MarR_2
NAD_binding_9
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AIM24237
LinkDB
All DBs
Position
5031964..5033853
Genome browser
AA seq
629 aa
AA seq
DB search
MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEIDALGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAIRTALENQPNLMI
FQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPS
ISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSVLAPQHGDTPVPVFSFLGDASQHPEQM
ACYITHTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMEGMQNARIIRPGYAIEYDFFDPRDLKPTLESK
FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFAAEQEGWAPRRDQAYLGVLVDDLSTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWARYSEKLERIERERQRL
RDIWMHPHAENVEQVNALLKAPLSREANGEELLRRPEMDYAQLTATEAFAPPLDDVQAAE
QVEIQVKYEGYIARQQEEIEKQQRNENTVLPLDLDYRQVSGLSNEVIAKLNDHKPNSIGQ
ASRISGITPAAISILLIWLKKQGLLRRSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttatccagatcaatttgacgtcatcatcatcggtggtggccatgcaggtaccgag
gccgccatggctgcggcgcgcatgggacgtcagactttattattgacacacaatatcgac
acgctgggacagatgtcctgtaacccggcgattggcggtattggtaaagggcatctggtt
aaggaaattgatgcactcggcggcctgatggcgacagcgatcgaccacgccggcatccag
tttaggatactaaacgccagcaaaggcccagccgttcgcgccacacgcgctcaggcggat
cgcgtgttgtatcgccaggctatccgtaccgcgttggagaaccagcccaatctgatgatc
ttccaacagccggttgaggatctgatcgtcgaaaacgatcgcgtcgtgggcgccgtcacc
caaatgggcctgaaattccgcgccaaagcggtggtattgaccgtaggcaccttcctggac
ggcaagatccatatcggcctggaaaattacagcggcggccgcgccggggatccgccttcg
atctcgctgtctcagcgtttgcgtgaactgccgctgcgcgtcaaccgcttgaaaaccggg
acaccgccacgcatcgacgcccgcactatcgatttcagcgtactggcgccgcaacacggc
gatacgccggtgccggtattctcgttcctgggcgatgccagccagcatccggaacaaatg
gcgtgctatatcactcataccaatgagaaaacccatgacgtgatccgcaataacctcgat
cgcagcccgatgtatgccgggatcatcgaagggatcggcccacgttactgcccgtcgatc
gaagacaaggtcatgcgctttgccgatcgcaacgcgcaccagatcttcctcgagccggaa
ggcctgaccagcaatgagatttaccctaacgggatctccaccagcctgccgttcgatgtg
cagatgcagatcgtccgttcgatggaagggatgcaaaacgcgcgtattattcgccctggt
tatgctatcgagtacgatttcttcgatccgcgcgacctgaaaccgacgctggaaagcaaa
ttcattcaggggctgttctttgccggtcaaatcaacggcaccaccgggtatgaagaagcc
gccgcacaggggctgctggccggtctgaacgccggtcgcttcgccgccgagcaagaaggc
tgggcgccacgtcgcgatcaggcttatctcggcgtgctggtggacgacctcagcaccctc
ggcaccaaagaaccgtaccgcatgtttacctcacgcgccgagtatcgtctgatgctgcgc
gaagacaacgccgatctccgcctgacggaaaaaggccgtgaactcggcctggtggacgac
gtgcgttgggcgcgctacagcgagaagctggagcggatcgaacgtgaacgtcagcgcctg
cgcgacatctggatgcatccgcatgccgagaacgtcgaacaggtcaatgcgttgctgaaa
gcgccgctgtcacgcgaagcaaacggcgaagagctgctgcgccgtccggaaatggactac
gcgcaattgaccgccaccgaggccttcgcgccgccgttggacgatgtacaagccgccgag
caggttgagatccaggtcaaatacgaaggctacatcgctcgtcagcaggaagagatcgaa
aaacagcagcgcaacgagaataccgtgttgccgttggatctcgactaccgtcaggtttcg
gggttgtcgaacgaagtgatcgccaaactgaacgatcacaaaccgaactccatcggccag
gcttcacgcatctccggcattacgccggcggcgatctcgattttgctgatttggctgaaa
aagcaggggctgctgcgccgcagcgcataa
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