KEGG   Suncus etruscus (white-toothed pygmy shrew): 125997991
Entry
125997991         CDS       T09902                                 
Symbol
KDM6B
Name
(RefSeq) lysine-specific demethylase 6B
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:setr03036]
    125997991 (KDM6B)
Enzymes [BR:setr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     125997991 (KDM6B)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125997991 (KDM6B)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL TPR_2 TPR_1 TPR_7
Other DBs
NCBI-GeneID: 125997991
NCBI-ProteinID: XP_049622140
LinkDB
Position
20:complement(43457952..43476434)
AA seq 1682 aa
MHRAVDPPGARTAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQPPLSAPL
PPSHGSSSGHPNKPYYAPGTPTPRPLHGKLESLHGCVQALLREPAQPGLWEQLGQLYESE
HDSEEAIRCYHSALRYGGTLAELGPRLGRLQQAQLWNFHPGSCQHRAKVLPPLEQVWNLL
HLEHKRNYGAKRGGPPVKRAAEPPVVQPMPPAALSGPSGEEGLSPGGKRRRGCSSEQTGL
PPGLPLPPPPLPPPPPPPPPPPPPPPPLPGLPTSPPFQLTKPGLWSTLHGDAWGPERKGS
APPERQDQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCPPATRPPG
SDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTSSSSSSSSSSNTGLRGVEPS
PGIPSHYQTPALEVSSHQGRLGPSTHSSRKPFLSAPTTTSHLPLPPGPPSPPPPCPRLLR
PPPSPAWLKGPAGRPARDDGEILEELLYGPEGRHRPPPPHLPHREGFLGPPAPRFSVGTQ
DSHTPPTPPTTTTTTSSSSSSSNNNSSGGSGSNGNSSGSGSSSNNGSHSSSVSFPPPPYM
ARNMDPLPRPPSPILSPQDPPLAPLTIALPPAPPPSCHQNTSGSFRRPESPRPRVSFPKT
PEVGPGPSPGPLNKPSQPVPPRVGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLAN
IMKMLDESIRKEEEQQQQEAGVGPPPPLKEPFPPLQSAFPTDSSPSHTAATSAAAATTTA
TSPATQEEEKKPPPALPPPPPLAKFPPPPQPQPALPPVPPPASPANLLKSLASVLEGQKY
CYRGTGTTASTRPGPLPATQYSPGPPSGATAPPPSTSVAPGAQGSPKPSASSSSQFSTSG
GPWALEHRAGEELAPGPIPPAPQPPPLPLPPTRSESEVLEEISRACETLVERVGRGAADS
ADPVDTADPVDSVNERLLPPVQAKEESSGVVAATGACGSKRRQKEHQKDHQKEHQKEHQK
EHRRHRRACKDSVGRRPHEGRAKAKAKAPKEKSRRVLGNLDLQSEEIQGREKARPDLGGA
SKAKPPTAAAPPPAPVPSAQPTPPSAPAPGKKTREEAPGPPGVSRADMLKLRSLSEGPPK
ELKIRLIKVESGDKETFIASEVEERRLRMADLTISHCAADVVRASKNAKVKGKFRESYLS
PAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRGLAGS
LRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYA
QYQASSFQESLQEEKESEDEESEEPDSTTGTPPSSTPDPKNHHIIKFGTNIDLSDAKRWK
PQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNI
NIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDDLYASNIPVYRFVQRPGDL
VWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNV
ARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAYQGRVKDEPAYYCNECDVE
VFNILFVTSENGSRNTYLVHCEACARRRSAGLQGVVVLEQYRTEELVQAYDAFTLAPASS
SR
NT seq 5049 nt   +upstreamnt  +downstreamnt
atgcatcgggcagtggaccctccaggggcccgcactgcacgggaagcctttgcccttggg
ggcttaagctgtgctggggcttggagctcctgccccccacatccccctcctcgaagcgca
tggctgcctggaggcaggtgctctgccagcattgggcagcccccactttcggctccccta
cccccttcacatggcagtagctctggccaccccaacaaaccatattacgctccagggaca
cccaccccaagacccctccacgggaagctggaatcgctgcatggctgtgtccaggcgttg
ctgcgggagccagcccagccaggactctgggagcagcttgggcaactgtatgagtccgag
catgacagtgaagaggccatacgctgctaccacagcgcccttcgttacggaggaaccttg
gccgagctgggaccccgcctcggccgactgcaacaggcccagctctggaattttcatcct
ggctcttgccagcaccgagccaaggtcctgcccccccttgagcaagtatggaacttgctg
caccttgagcacaagcgaaattatggagccaagcgggggggtcccccagtaaaacgagct
gctgaacccccagtggtgcagcctatgccacctgcagcactctcaggcccctcgggggag
gagggcctcagtcctggaggcaagcgcaggagaggttgcagctctgagcagaccggcctt
cctccagggctgccgctgcctccaccaccattgccaccaccaccgccgccgccgcctcca
cccccgccaccaccaccacccctgcctggcctacccaccagcccgccatttcagctgacc
aagccgggactgtggagtaccttgcatggagatgcctggggtcccgaacgcaagggttca
gcacccccagagcgccaggatcagcggcactcgctgcctcacccctacccatacccagct
ccagcctacaccgcacacccccctggccaccggctggtcccggctgcacctccaggccca
ggcccccgccccccaggagcagagagccatggctgcccacctgccacccgtccccccgga
agtgaccttagagagagcagagttcagaggtcgcggatggactccagcgtttcaccagca
gcaaccaccgcctgcgtgccttacgccccttcccggccccctggcctccctggcaccacc
agcagcagtagcagcagcagcagcagcagcaacactggtctccggggcgtggagcccagc
cccggcattcccagccattaccaaactcccgcgcttgaggtctcctctcaccaaggccgc
ctggggccctccacacacagcagtcggaaaccattcctgtcggctcccacgaccacttcc
cacctgccccttccacctggccccccatcgcctccacctccgtgtccccgccttttacgc
cccccaccttcccctgcctggctgaagggtccggccggccggccagcccgagatgacggc
gagatcttagaggagctcttatacgggcccgagggacgccaccgcccgccccctccacac
cttccccatcgcgagggcttcttggggcccccagccccccgcttttccgtgggcactcag
gattctcacacccctcccactcccccaactactaccaccaccaccagcagcagcagcagc
agcagcaacaacaacagcagcggcggcagcggcagcaacggcaacagtagtggcagcggc
agcagcagcaacaatggcagccacagcagcagtgtgtctttccccccacctccatatatg
gccagaaatatggacccccttcccagaccccccagtccgatactgagcccccaggatcca
cctctcgctcccctgactattgccctgcctccagccccacccccctcctgccaccaaaat
acctcaggaagcttcaggcgcccggagagccctcggcccagggtctccttcccaaagacc
cccgaggtggggccagggccttccccaggccccctgaataaaccttcccagcctgtgccg
cccagggttggggagctgcctgcccgtggcccacgactctttgattttcctcctacccca
ttggaggaccagtttgaggagccagcggagttcaagatcctgcccgatggactggccaac
atcatgaagatgctagacgaatccatccgcaaggaggaagagcagcagcagcaggaggca
ggcgtcggccctccaccgcccctgaaggaacccttcccacctctgcagtctgcgtttccc
accgactcatccccgagccacactgctgccacctctgctgccgccgccaccaccaccgcc
acctccccagccacgcaggaagaggagaagaagccaccaccagccctgccaccgccaccg
cctctagccaagttccctccgcccccccagccgcagcctgcgctcccccctgtccccccg
ccagccagcccagccaacttgctcaaatccttggcctctgtgctggagggacaaaagtac
tgttaccggggaactggaaccactgcttccacccggcctgggcccctgcccgctactcag
tattcccctggccccccatcaggtgctaccgccccaccaccatccacctcagtggccccc
ggtgcccagggctccccaaagccctctgcttcctcttcatctcagttctctacctcaggt
gggccctgggccctggagcacagggcaggcgaggagctagccccaggacccatacccccc
gccccccaacctccacccctccctttgcctcctactcgctctgagtctgaggtgctagaa
gagatcagtcgggcttgtgagacccttgtggagcgggtgggtcgcggtgctgcagactcg
gcagacccggtggacactgcagatccagtggacagtgtgaatgagcgactgctgccacct
gtccaggccaaggaggagagctctggggttgtggcagcgacgggagcctgcggcagcaag
cggcggcagaaggaacaccagaaggaccaccagaaggagcaccagaaggagcaccaaaag
gaacaccgaaggcacaggcgggcctgtaaggacagtgtgggtcggcggcctcacgaaggc
agggccaaggccaaggccaaggcccccaaagaaaagagtcgcagggttctgggcaatctg
gacttgcagagcgaggagatccagggtcgggagaaagccaggcctgatctcggcggggcc
tccaaggccaagccccccacggctgccgcccctccgccagctcccgtcccctcagctcag
cccacacccccgtcagcccctgcccctgggaagaagactcgggaggaagctccagggcca
cccggtgtcagccgggctgacatgctgaagctgcgctcacttagcgaagggccccccaag
gagctaaagatccggctcatcaaggtagagagcggcgacaaggagaccttcatcgcctct
gaggtggaagaacggaggcttcgaatggctgacctcaccatcagccactgtgcagctgat
gttgtgcgcgctagcaagaatgccaaggtgaaagggaaatttcgagagtcctatctgtcg
cctgcccagtctgtgaaaccgaagatcaacactgaggagaaactgccccgggaaaagctc
aacccacccacacccagcatctatctggagagtaaacgggatgccttctcaccagtgctg
ctacagttttgtacagatccccgaaatcccatcactgtcatccgtggcctggctggctcc
ctccgactcaacttgggactcttctccaccaagacactggtggaggcaagtggtgagcac
actgtggaggtacgcacccaggtgcagcagccctcagatgagaactgggatctaacgggc
actcggcagatatggccctgtgagagttcccgttcccacaccaccattgccaagtacgca
cagtaccaggcctcgtctttccaggagtccctgcaggaagagaaggagagtgaggatgag
gagtcggaggagccggacagcaccacgggaactcctccaagcagcaccccggacccgaag
aaccatcatatcatcaagtttggcaccaatatcgacctgtccgatgccaaacggtggaag
ccccagctgcaggagctgctgaagcttcccgcctttatgcgggtaacatccacaggaaac
atgctgagccatgtgggccacaccatcctgggcatgaacactgtacagctgtacatgaaa
gtccctggcagccgaacaccaggccaccaagagaacaacaacttctgctctgtcaacatt
aacatcggccctggcgactgtgagtggtttgcggtccacgaacactactgggaaaccatc
agcgccttctgtgaccggcacggcgtggactacctgacaggttcctggtggccaatcctg
gatgacctctatgcttccaatatccctgtatatcgcttcgtgcagcgccctggagacctc
gtgtggattaatgcgggaaccgtgcactgggtgcaggccactggctggtgcaacaacata
gcctggaatgtggggcccctcaccgcctatcagtaccagctggccctggaacgatatgag
tggaacgaggtgaaaaatgtcaaatcgattgtgcccatgattcacgtgtcctggaatgtg
gctcgaacagtcaaaatcagcgatcccgatttgttcaagatgatcaagttctgcctcctg
cagtccatgaagcactgccaggtgcaaagagagagtctggtgcgggccgggaagaaaatc
gcctaccagggccgggtgaaggacgagccggcttactactgcaacgagtgcgacgtggag
gtcttcaacatcctgtttgtgaccagcgagaacggcagccgcaacacatacctggtgcac
tgtgaggcctgtgccaggcgccgcagcgctggcctccagggtgtagtggtgctggagcaa
taccgcacagaggagctggtacaggcctacgacgccttcacgctggccccagccagctcc
tcgcggtga

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