Suncus etruscus (white-toothed pygmy shrew): 125998047
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Entry
125998047 CDS
T09902
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04082
Neuroactive ligand signaling
setr04721
Synaptic vesicle cycle
setr04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125998047 (SLC6A11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
125998047 (SLC6A11)
04721 Synaptic vesicle cycle
125998047 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
125998047 (SLC6A11)
Transporters [BR:
setr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125998047 (SLC6A11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125998047
NCBI-ProteinID:
XP_049622235
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Position
20:complement(34104841..34191252)
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AA seq
628 aa
AA seq
DB search
MTAEKALPLGNGKAAEEGREAEAPGSGGGCTVAATREPRDKAVHERGHWNNKVEFVLSVA
GEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRK
VCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTERCVEFQ
KLNASNHSHVALQNATSPVMEFWERRVLAISDGIEHIGNLRGELALCLLAAWTVCYFCIW
KGTKSTGKVVYVTATFPYIMLLVLLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGT
QIFFSYAICLGCLTALGSYNNYNNNCYRDCILLCCLNSGTSFVAGFAIFSVLGFMAYEQG
VPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVD
MYPKVFRRGYRRELLILALSVVSYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFEC
VCIGWVYGSDRFYDNIEDMIGYRPLSLIKWCWKVLTPGICASIFIFFLVKYKPLKYNNVY
TYPAWGYGIGWLMALSSMLCIPLWVFLKVWQTEGTLSEKFRKLTVPSADLKMRGKLGSSP
RMVTVNDCEAKLKGDGVIAAITEKETHF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggagaaggctctgcccctgggcaacgggaaggcggccgaggaggggagagag
gccgaggctccgggcagcggtggggggtgcacggtggcagctacgcgcgaaccccgagac
aaggcggtccatgagcggggccactggaacaacaaggtggaattcgtgctgagcgtggcc
ggagagatcatcgggctgggcaacgtgtggcgcttcccctacctgtgctacaagaacgga
ggaggtgcttttctgattccctatgtggtgttttttatctgctgtgggattcctgtgttt
ttcctggaaacagctctggggcagttcaccagtgaaggtggaattacctgttggagaaaa
gtgtgccctttatttgaaggcatcggctatgccacacaggtgatcgaggcccacctcaat
gtctactatatcatcatcctggcctgggccatcttctatctgagcaactgcttcaccacg
gagctcccctgggccacatgtggccatgagtggaacacagaacgctgcgtggagttccag
aagttgaatgccagcaatcacagtcatgtggccctgcagaacgccacctcccctgtcatg
gagttttgggagcgccgcgtgctggccatctcagatgggattgagcacatcgggaacctt
cgtggggagctggcgctgtgtctcctggcagcctggaccgtttgctacttctgcatctgg
aaagggaccaagtcgacgggcaaggtcgtgtacgtcacagccacctttccctacatcatg
ctgctggtcctcttaatccggggagtgacgctgcctggtgcctcggagggcatcaagttc
tacctgtaccctgacctctcccggctgtccgacccacaggtgtgggtggacgctggcaca
cagatctttttctcctacgccatctgcctgggctgcctgacggcactgggaagttataac
aactacaacaacaattgctacagggactgtatcctgctttgctgtctaaacagtggcaca
agcttcgtggctggcttcgctatcttctccgtcctgggcttcatggcatacgagcagggg
gtgcccattgccgaggtggcagagtcaggtcccggcctggccttcattgcctatcccaag
gcggtcaccatgatgccattgtcccctctgtgggcaaccctcttcttcatgatgctcatc
ttcctgggcctggacagccagttcgtgtgcgtggagagcctggtgacagccgtggtggac
atgtaccccaaggttttccgcaggggctaccggcgggagctgctcatcctggcgttgtct
gttgtttcctactttctgggccttgtcatgctgacagagggcggcatgtacatcttccag
ctcttcgactcctatgcagccagcggcatgtgtctcttgttcgtggccatcttcgaatgc
gtatgcatcggctgggtgtacggaagcgatcgtttctatgacaacattgaggacatgatt
gggtaccggccactgtctcttatcaagtggtgctggaaggtgctgacaccaggaatctgt
gcgagcatcttcatcttcttcctggtcaagtacaagccgctcaagtacaacaacgtctac
acatatccggcctggggctacggcatcggctggctcatggcgctgtcctcaatgctctgc
atccctctgtgggtcttcctcaaggtgtggcaaacagagggcaccctgtctgagaaattc
cgaaagctgacggtccccagtgccgacctgaaaatgcgtggcaagctcgggtccagccca
cggatggtgacggtgaatgactgcgaggccaagctcaagggcgacggggtgatcgcggcc
atcacagagaaagagacgcatttctga
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