KEGG   Suncus etruscus (white-toothed pygmy shrew): 126023941
Entry
126023941         CDS       T09902                                 
Symbol
PCGF1
Name
(RefSeq) polycomb group RING finger protein 1
  KO
K11487  polycomb group RING finger protein 1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03083  Polycomb repressive complex
setr04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    126023941 (PCGF1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    126023941 (PCGF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:setr03036]
    126023941 (PCGF1)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     126023941 (PCGF1)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-rbx1 zf-C3HC4_3 zf-RING_UBOX Rad60-SLD ATG8 zf-RING_5 zf-Nse Cobl zf-ANAPC11 zf-RING_10 TRAF3_RING zf-C3HC4_4
Other DBs
NCBI-GeneID: 126023941
NCBI-ProteinID: XP_049640325
LinkDB
Position
12:10609158..10611448
AA seq 301 aa
MRPGRGLSDAQPIRDDLGPGCRATSPAPRAATGSGGPGSAFKMASPQGGQIAIAMRLRNQ
LQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT
SKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQP
SGEEPALSNLGLPFSSFDHSKAHYYRYDEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRA
EVRHLRRVLCRRLMLSPQHVQLLFDNEVLPDHMTMKQIWLSRWFGKPSPLLLQYSVKEKR
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaggcctgggcggggcctgtcagacgctcagccaatccgcgacgacctaggcccgggt
tgccgggcgacaagtcccgccccacgggcggcaaccggaagtggcgggccgggctcagcc
tttaagatggcgtctcctcaggggggccagattgcgatcgcgatgaggcttcggaaccag
ctgcagtccgtgtacaagatggacccgctccggaacgaggaggaggtccgagtgaagatc
aaagacctcaacgagcacatcgtctgctgcctgtgtgcgggctacttcgtggacgccacc
accatcacggagtgtctgcatactttctgcaagagttgtatcgtgaagtacctccagacc
agcaagtactgccccatgtgcaacatcaagatccacgagacacagcccttgctcaacctc
aaactggaccgggtcatgcaagacatcgtgtacaagctagtgcctggcttgcaggacagt
gaggagaaacggattcgggaattctaccagtcccgaggcctggaccgggtcacgcagccc
agtggggaagaaccagccttgagcaacctgggcctccccttcagcagcttcgaccactcc
aaagcccactactatcgctatgatgaacagctgagcttatgcctggagcggctcagttct
ggcaaagacaagaataaaaatgtcctgcagaacaaatatgtccgctgttcggtcagagct
gaagttcggcatcttcgtcgggttctctgtcgccgcttgatgctaagtccccagcatgtg
cagctcctctttgacaatgaagtactccccgatcacatgaccatgaagcagatctggctg
tcccgctggttcggcaagccatctcctttgcttttacagtacagtgtgaaagagaagagg
aggtag

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