Suncus etruscus (white-toothed pygmy shrew): 126027721
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Entry
126027721 CDS
T09902
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126027721 (TAF1C)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
126027721 (TAF1C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
126027721
NCBI-ProteinID:
XP_049642679
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All DBs
Position
14:complement(37905922..37911630)
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AA seq
855 aa
AA seq
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MDFPSSLHPSLFTTGPLGLSETPDLSFTSSWRDTLNLSQALPLSPEIEAPLSAKSLFWVP
ETPGPLPLLPPGLDPWTPGVTAVDLLFRGRRPFRRAPRAVLDATEQISRFLWDHGDVAFA
PLGKLMLENFKLEGNRSRSKKKTVVSVETLLRDLDGYQPWGCPWAYMTHRQRRFSLVGGS
VLGRSVATLLAELLQEELALRWEQLLLDDAFTGGALAWLPGRTPHNRQLFYPAGGALDKL
YFLEVSVNAEGDPQILGEPGHIQLRGPIRQVVACTVQGEALLAVRSDYHCALWKVGSQGR
PAAVQVLQVTKGATGISLSPHLPGELAVCSRSGAVCLWTPQDGLRQVYKDPNTLVFRDPS
PWRWADFSAHPRVLTVADRTGVKIVDTQGPPGCGLLLFRSGAEASCQKGERVLLSKHLGE
SSPECLQPTLHLVCTQFSLYLMDERMPLLPMLKWSHGLPSAPLMAHLLPAPAPGCPCLLL
LGGQGGQLQLLSITGGSTSSPRLTGPPQSLPSSQDSLSAFPLLEPSSHRRLQERLEAPTI
GLTATIPHSTSASTTPALSLFQLSAAGDIFHQRLHLQADLQADHRPPKNSGPASWSPQAT
AFCSSWLKALLRVPATPPAWTAPTFSHRYPLKCRELRGATGQVPEGLRAAMARGQLLRRT
DLGQLQTLESPPAPEPGPEDELTERLETAWEGRLDAWWQQQYGGSMNSGRSRCRAKRRTT
LSSTFSSLSYCSDPPSPPRSPDPEDSEARPLPPATPTPLSQELSQESWVRDIPSERQQTL
RDYMAQLPLQETTLAAAPSLSSQTRSLQATPNKTAAQRRPQGDPWDGTTMSLSQTSTVAT
PSRRQAPRKKARMGF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggactttcccagttcgctgcatccctcgttgtttaccactggccccctgggcctgagt
gagaccccagacctgtctttcacaagcagctggagagacacattgaacctgtcccaggct
ctgccacttagccctgagatcgaggcaccgctctcagccaagagtctgttctgggtgcca
gagactccagggcccctgcctctgctacctcctggactggacccttggactcctggagtg
acagctgtggacctgcttttccgcggacgtcgccccttccggagggcaccccgtgcagtg
ctcgatgccactgagcagatcagccgttttctgtgggaccatggggatgtggcctttgcc
ccactggggaagctgatgctagagaacttcaagctggagggcaatcggagccgctctaag
aagaagacagtggttagtgtggaaacgctgctacgggaccttgatggataccagccctgg
gggtgcccctgggcctacatgacccaccgacagcggcgcttctccttggttgggggatca
gtgctggggaggtcggtggctacgctgttggcagagctgctgcaggaggagctggccctg
cgctgggagcaactacttctggatgatgcgttcacggggggcgcgctggcctggcttccg
ggcaggacaccccacaacaggcagctgttttaccccgcaggtggcgccctggacaagctg
tatttcctcgaggtcagtgtaaatgcagaaggtgacccccagatccttggggagccgggc
catatccagctccggggtcctattcggcaagtggtggcttgcactgtccagggagaagct
ctgttggctgtccgctccgactaccactgcgccctgtggaaggtgggtagccaggggcgg
cctgccgctgttcaggtgctgcaggtcacaaagggcgccaccggaatcagcctcagccca
cacctgcctggagagctggccgtctgcagcagatcgggagccgtctgtctgtggacccct
caggatggtctacggcaggtgtacaaggatcccaatacccttgtgttccgggacccgtct
ccttggcgctgggcagacttctctgcgcatcctcgggtgctaaccgtggctgaccgtacg
ggtgtgaagattgtcgacacgcagggccctccaggctgtggtttgctccttttccgctct
ggagcagaggcctcgtgccagaagggagagcgtgtcctcctctccaagcatctgggggag
tcaagccccgagtgtctgcaacccacactccatctcgtatgtacccagttctctctgtac
ttgatggacgagcgcatgcccctattgcccatgctgaagtggagccatggcctcccctcc
gcgcctctgatggctcatctgctacctgcacctgccccaggctgcccatgcctgctgctt
ctgggaggccagggagggcaactgcagctcctgtccatcactggaggcagcacctctagt
ccacgtctgacaggtcctccccagtccctcccttccagccaggactctctctctgccttt
ccactgctggagcccagcagccatcggaggctacaggagcggctggaagccccaaccata
ggtctgaccgccactatcccacactccaccagcgcgtctaccacccctgccctgtcgctc
ttccaactctctgctgcaggcgacatcttccaccagcgcctccacctccaggcagacctc
caggcagaccacaggcctcccaagaactcgggacctgcctcctggagcccccaggcaacg
gctttctgcagcagttggctgaaggctctgctcagggtgcctgccacaccccctgcctgg
actgcccctaccttctcccaccgctatccactgaagtgcagggagctgcggggtgcaacc
ggacaagtgcctgagggtctgcgggcagccatggccaggggacagcttctgcggaggaca
gacctgggccagttgcagaccctagagtcgccgccagctcccgaaccgggtcccgaggac
gagctcacggagcgcctggagactgcctgggagggccggctagacgcctggtggcagcag
cagtatggtgggagcatgaactccgggaggtcgcgctgcagggccaaacgccgcactacg
ctgtccagcaccttctcttccctcagctactgctcagacccccccagcccaccacgcagc
cccgatcccgaggactccgaggccaggccgctgccccctgctacccccaccccgctgtca
caggagctgagccaggagtcctgggtgcgggacatcccctcagagcggcagcagaccctc
cgcgactacatggctcagctcccgctgcaagagaccacactggctgctgccccctctctc
agctcccagacccgaagcctccaggccacccccaacaagactgctgcccagcggcggccc
caaggagatccctgggatggcactaccatgtccctatcccagacctctaccgtggccacc
ccgtccaggaggcaggcgccccggaagaaagcgcgcatgggcttctga
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