Saccharomyces eubayanus: DI49_5633
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Entry
DI49_5633 CDS
T08138
Name
(RefSeq) SKI3-like protein
KO
K12600
superkiller protein 3
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_5633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_5633
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
DI49_5633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_16
TPR_8
TPR_1
TPR_17
TPR_12
TPR_9
ANAPC3
HrpB1_HrpK
T7SS_EccA1_N
ARM_TT21_N
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
28934769
NCBI-ProteinID:
XP_018219189
LinkDB
All DBs
Position
XVI:870504..874754
Genome browser
AA seq
1416 aa
AA seq
DB search
MSDVKQLLKEAKLELTRRDYEETIEISEEVLKLDPDNYFAHIFLGKAFSSLPPSNEGNSN
RHLESATAHYISATKLAPDNLLAWKGLFLLFKTTEAVPNILSYDEYFDLCGQYADILLKQ
EQSQVELINDIKLLKKTHTDCRKAFYEHLKPGSLMAETIGRHLATPQDALLNLIKILSNT
EVTEIGKAVSQNRLRLKASDPDYQIKLNSFSWEIIKNSEIDQLYNQLVNILTDDQLRSDT
ENEWLEYRIKVLKSMPLDVKKGFFMKVKDMVEDMVLVDHQSLLAWQKFFEWKDYEDLDNM
DAMLILQYFKKFPKDPLAMILYSWVFSKLSKYDIKSLEATNQPTESHDKRNKETDVKNTD
EHVIKDQDENENEPKEDDEEDFDDMEIGLLEDEVVTALTENIVKCKNNILAHRILCQYYL
LTKEYEASLPYIKTGISLIAYNIKDLGVYLPLTKREFSLDLATVYTYVDAPKDHNAALRL
YDNILSGDSDNIQAKMGKGIIFIERKNWEEAMTLLTEVHEQSPDNLEVLSELSWSKAHMG
FMEEALIGLDGVVKAIKGMDLRSIDFRALNLWRQAKVYLMKHASLDDENQENIKFAFKLL
IQSIKILDTFAPGFSTLGDIYCHYYKDHSRAFKCYFKAFDLDAGDYTAAKYITETYASKP
NWQAASSIASRLIKGEKAKAELRSNNWPFRVVGVAHLEKQEESDSIEWFQSALRVDPNDV
ESWVGLGQAYHACGRIEASIKVFDKAIELQASHTYARYFKALSLCDMGEYLESLETLEKV
CQEVATEESFQIGLVDVLVKYSLDLYSQGFLMKSVAIANDTIERIRIIITELQCTNQQIW
ICLSQVLRLFIWIESKVDTLPVESLVSIFQISGLTETKEVDSIDNIKIDTLLDSTTDDNV
SIACKFLILASKYSVSNQSMSDAAGTIRASYWYNIGISELTAFVTLKDSHYRDAAVFAFK
KSIQLQSNTSETWIGLGIATMDINFRVSQHCFIKATALEPKATDIWFNLAMLGLKKNDAE
FAQQVLNKLQSLAPQDSSPWLGMALILEQQGNIVESSKLFAHSYILSNGSSKAAQVLYAK
SVLENHIDNGDDERDIETVEKLTTVSIALDQFFKKSPENPFAIQCALLTFERLHHYEPAN
KLADQLAGILEKRFEKTQDEKELFNFGIIKGQFARIHLGLGHFELSIENAELSQGIISES
SDKKALRTKISNHISLGLSYFFLNDFDQTLRQFQELLRISKESKHLVILIAKVLYDVGEN
DAKEIALQELTEYITAKGADLLITLTIAAMSILDDKREDLSIIVNELKALPLSSLIADKH
KDAPYLIEEITKRLYNDDTCKQTWQRSAYFFPNNLEVWNRLNKNIQRKIASNGQNKVTAE
EMSKLYCESKNLRSVQRSVFLCPWNKTVVNALKECF
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgtcaaacaactgttgaaagaagccaagctagaattgacgagacgggactac
gaagagaccattgaaatttctgaagaagttcttaaattagaccctgacaattactttgca
catatctttttaggcaaagcgttttcgagtcttccacctagtaatgaaggcaactcaaat
cgtcatttggagagtgccactgcccattatatatccgctaccaaattggcccctgacaac
cttttagcatggaagggtcttttcctcttattcaagaccaccgaggccgttccaaatata
ctttcgtatgatgaatattttgatttatgtggccaatatgccgatattcttttgaagcag
gagcagtctcaagtagagctgataaatgacataaagcttttaaagaaaactcatacagac
tgtaggaaggccttttatgagcatttgaaacccggatctttaatggccgaaaccattggt
cgtcatttagctacaccacaggacgccttattgaatctcataaaaattttgtccaataca
gaagtcacagaaattggtaaggccgttagtcagaatagattaagactaaaagccagtgat
ccagattatcagattaaattaaactcattctcctgggaaatcattaaaaactcagaaatt
gatcagctatacaaccaattagtaaatattctcaccgatgatcaactgagaagtgacacc
gaaaatgagtggttggaatatagaatcaaagtcctaaaatctatgccgttagatgtgaag
aagggtttcttcatgaaagtcaaagacatggttgaagacatggttcttgtagatcaccag
tctttacttgcctggcagaaattttttgagtggaaggattacgaagatctggacaacatg
gatgccatgctgatattacagtattttaagaagtttcctaaagatcctttagcgatgatt
ctttattcttgggttttttcaaaactatcaaaatatgatatcaagagtttggaagccact
aatcaaccgactgaaagccatgacaagagaaataaggaaacagatgtcaagaatacagat
gaacatgtaattaaggatcaagatgaaaatgaaaatgagccaaaagaagatgacgaagaa
gatttcgatgatatggaaatcggtttattggaagatgaagttgtaactgcattaacagaa
aatatcgtaaagtgcaaaaataatattttggcacatcggattttatgtcagtattatttg
ctcaccaaggaatacgaagcatctttgccgtacatcaaaacgggaatttcattaatcgct
tataacattaaggatttgggagtttatttgccattaactaaaagagagttttctctggat
ctggcaactgtttatacatacgttgatgctccaaaagatcataatgctgcgttgagatta
tacgacaacattttatctggtgattctgacaatatacaagcaaaaatgggtaagggtata
attttcattgaaagaaagaactgggaggaggcaatgactttattgaccgaagtgcatgaa
caatctcctgataacttggaagttttgtctgaactatcgtggagtaaagcacatatgggt
ttcatggaagaagctctgattggcctagacggggtggtcaaggctatcaaaggtatggat
ttgcgttcgattgatttcagagcattgaacttatggaggcaagcaaaagtatatctaatg
aaacatgcttcacttgacgatgaaaatcaagaaaatatcaagtttgcattcaaactacta
attcaaagtatcaagatcttggacacttttgcccctggtttctcaacgctgggtgatatc
tattgtcactattataaagatcattcaagagctttcaaatgttacttcaaagcgtttgat
ctggatgcaggtgattatacggctgcaaaatatattacagagacatatgcaagcaagccc
aattggcaagccgcctcttccattgcttcaagattgatcaaaggcgaaaaggccaaggca
gaattacgttcgaacaattggccatttagagtcgttggggttgctcacctggaaaagcaa
gaagaaagtgactctattgagtggtttcaatctgctttacgcgttgaccccaatgatgtt
gagtcatgggtaggtctgggacaagcataccatgcgtgtggtcgtatagaagcatcaatt
aaagtcttcgataaggccattgaattacaagcttcacacacttatgcgcgatatttcaaa
gctctatcactatgtgacatgggtgaatatcttgaaagtttggagacgctagaaaaagtg
tgccaagaagtggctaccgaagaatctttccagattggtttggtggatgtgcttgtaaaa
tactccttggatttatattcacaggggtttttaatgaaatcagtagcaattgccaacgat
actattgaaaggattaggataataatcaccgagttgcaatgcacaaaccagcagatttgg
atttgcctttcacaagtcttgagactgttcatttggatagaatccaaggttgatacttta
cctgttgaatcactagtatcaattttccaaatttctgggcttactgaaactaaagaagtt
gattccatcgacaatattaaaattgacaccttgctggatagtactactgacgataatgta
tccattgcatgtaaatttttgatattggcttcaaaatacagtgtttccaatcaaagcatg
tcagatgccgcaggaacaattagagcttcatactggtataatattggtatctctgagctt
accgcatttgttactttgaaagattctcattatagagatgctgcagtttttgctttcaag
aaatcgattcaactacaatccaatacaagcgaaacttggattggactgggtatagcaact
atggatataaactttcgtgtttcacaacattgtttcattaaggcaactgctttggagccc
aaagcgaccgatatttggttcaacttggctatgctgggcttgaagaaaaatgatgctgag
tttgcccagcaagttctcaataagttacaaagccttgcgccacaggattcatctccttgg
ttaggaatggctttaatacttgaacaacaagggaatattgtcgaaagctctaaattgttt
gcacactcctacatattatccaatggtagttcaaaggccgcccaagtattatatgctaaa
agtgtacttgaaaatcatattgacaacggtgatgacgaaagagatattgaaacagtagaa
aaactaaccactgtttcaatagctctggatcagttcttcaagaaaagccctgaaaatccg
ttcgctattcagtgtgctctgttaacctttgaaaggttacaccattacgagcctgctaat
aagttagctgaccaactcgcaggaatattggagaaaagatttgaaaaaactcaagacgaa
aaagagttatttaattttggtatcatcaagggacagtttgcccgtattcatctaggtctg
gggcattttgaactctccattgaaaatgcagaattgtctcaaggtattatatccgaatcc
agtgacaaaaaagcattaagaacaaagatatcgaatcatatttctctaggattgagttat
tttttcctgaatgattttgatcaaacattaagacaatttcaagagttgctaagaatttcg
aaggaatctaagcatttggtgattttgatcgctaaggtactttatgatgtaggtgaaaat
gatgcgaaggaaattgccctacaagaactaacagaatatataaccgcaaaaggggcagac
ttgttaataacactaaccattgcagctatgtcaattctggatgacaagcgtgaagattta
agcattattgtaaatgaattgaaggccttgccattgtccagtctgatagcggataaacac
aaagatgcaccatatctgatagaagagataacgaaaagactttataatgatgacacctgt
aaacaaacatggcaaagaagcgcatattttttccccaataatctcgaggtctggaataga
ttgaataaaaatattcagcgtaaaatagcttctaacggtcagaataaagtcactgcagag
gagatgagtaaactatactgtgaaagtaaaaatttgagaagcgtgcaaagaagtgtgttc
ctgtgtccttggaacaaaactgtggtgaatgcactaaaagagtgcttttag
DBGET
integrated database retrieval system
