Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_12680
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Entry
STBHUCCB_12680 CDS
T01741
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STBHUCCB_12680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sex03400
]
STBHUCCB_12680
Enzymes [BR:
sex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
STBHUCCB_12680
DNA repair and recombination proteins [BR:
sex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
STBHUCCB_12680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEZ44981
LinkDB
All DBs
Position
complement(1247793..1248599)
Genome browser
AA seq
268 aa
AA seq
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MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL
KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER
CAETGIDYDIRSMEKPSDHAPVWATFRV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgcgcccgtccccatcaacttgaagcg
attgtcgaaaaacaccagcccgatgtgatcggtctacaggagacaaaagtccacgacgaa
atgttcccgctcgaagaggtcgcgaagctgggctataacgttttctatcatggacaaaaa
ggccattacggcgtcgcgctgctaacaaaagccacgcccatttccgtcagacgcggtttt
ccggatgatggcgaagaggcgcaacgccgcattatcatggcggaaatcccctcgccgctg
ggtaatatcaccgtcattaacggctatttcccgcagggggaaagccgggatcatccgttg
aagttccccgcgaaagcgcagttttatcagaacttgcaaaactatcttgaaacggaactc
aagtgcgataatccggtattaattatgggcgacatgaatatcagcccgaccgacctggat
attggcatcggcgaagagaaccgcaaacgctggctgcgtaccggtaaatgctccttcctg
ccggaggagcgtgaatggatgtcgcggttactgaagtggggattagtggacacgttccgt
caggcaaatccgcaaacgatggataaattttcgtggtttgattaccgttcaaaaggtttc
gtggataatcgcggactgcgcattgacctcttgctggcaagcgctccgctggcggaacgt
tgcgcagaaaccggtatagactacgacattcgcagtatggaaaaaccctccgaccatgcg
ccggtctgggcgacgtttcgtgtttga
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