Sphingobacterium faecium: MUK51_03655
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Entry
MUK51_03655 CDS
T08637
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sfae
Sphingobacterium faecium
Pathway
sfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK51_03655 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfae03019
]
MUK51_03655 (rny)
Messenger RNA biogenesis [BR:
sfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MUK51_03655 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
MctB
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
UXD70390
LinkDB
All DBs
Position
873306..874859
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AA seq
517 aa
AA seq
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MDIAIYIILSLIVGIAIGRYLLALMFTKQTQEAQEKVKSIIKEADQEAEHLKKKKLLEAK
EKFLQLKSEHEKEVSQRNNTISQKENTLRQKEQSVNQKLENLNREKQELDATRKQLEKLV
EVNESKSEEVEQIKLQHIKQLEGIAGVTAEEAKNQLVDSLREEARSQAISQIKDIVDEAK
LTATKEAKKVVIQTIQRTATESAIENTVSIFNIENDEIKGRIIGREGRNIRALEAATGVE
IIVDDTPEAIILSGFDPVRREIARLALHRLVTDGRIHPARIEEVVAKTRTQIEDEIVEIG
ERTAIDLGIHGLHPELIRMVGRMRYRSSYGQNLLQHSREVANFAATMAAELGLNVKHAKR
AGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPDVCNAIGAHHDEVEMTAMISPIVQAC
DAISGARPGARREVVESYIKRLKELEDLALSYPGVEKTFAIQAGRELRVIVESEKISDAQ
AEILAADISNRIQTEMTYPGQIKVTVIREIRSVAYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcaatttatatcatactttctctgattgttggtattgcaattggccgttat
cttttagctcttatgtttactaaacaaacacaagaagctcaagaaaaggtgaaaagcatt
ataaaagaagccgatcaagaagcagaacatctgaaaaagaaaaaactattagaagcaaaa
gaaaagtttctacagttgaaatcagagcatgaaaaagaggtcagccaacgcaataatacc
atcagtcaaaaggaaaataccttacgtcagaaagaacaatcagtcaaccagaagcttgaa
aacttaaaccgtgaaaagcaagaattagacgctacacgcaagcaacttgaaaaacttgtt
gaagtcaatgaaagtaagtctgaagaagtcgagcagatcaaattacaacatatcaagcaa
ttagaaggtattgctggggtgaccgctgaagaagctaaaaaccaattggtagactcacta
cgcgaagaagctcgctctcaagcgattagtcaaattaaagatatcgttgacgaagctaaa
ttgacagcaactaaagaagcaaagaaagtcgttatccagaccatacaacgtacggcaact
gaatctgcaattgaaaacaccgtttcgatttttaacattgaaaatgatgaaatcaaagga
cgtattatcggacgtgaaggacgtaatatccgtgctttagaagcagcaaccggtgttgag
atcattgtagacgatacacctgaagccattattttatctggttttgatccagtacgtcgt
gaaatcgcacgtttagctttacatcgtttggtgacagatggacgtatccacccggcacgt
atcgaagaggtcgtcgcaaaaacacgtacccagattgaagacgaaattgtggaaatcggt
gaacgtactgctattgacttaggtattcacggtttacatccggaattgatccgtatggtt
ggccgtatgcgttaccgttcttcttatggacagaatctattgcaacactcacgtgaggtc
gcaaattttgccgcaacaatggctgcagaattgggcttaaatgtgaaacacgcaaaacga
gctggtcttttacacgatattggtaaagtgcctgacgataatcctgaattgccacacgcg
attttagggatgcagttggccgaaaaatacaaggagcatcctgatgtgtgcaacgcaatc
ggtgcccaccatgatgaagtcgagatgactgctatgatttcaccaattgttcaagcttgt
gatgcgatctctggagcgcgtccaggagcacgccgtgaagtggtagagagttatatcaaa
cgtcttaaagaattagaagatctagcattatcatatccaggagttgaaaaaacttttgcg
atacaagcagggcgtgaactacgcgttattgttgaaagtgagaagatatcagatgcgcaa
gcagagattttagccgctgatatttcaaaccggattcagaccgagatgacctatccaggt
caaatcaaagtaactgttatccgtgaaatccgttcggtcgcatacgcgaaataa
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