Spirochaeta africana: Spiaf_0263
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Entry
Spiaf_0263 CDS
T01811
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfc03016
]
Spiaf_0263
Enzymes [BR:
sfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Spiaf_0263
Transfer RNA biogenesis [BR:
sfc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Spiaf_0263
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AFG36371
UniProt:
H9UFS8
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All DBs
Position
complement(323128..323790)
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AA seq
220 aa
AA seq
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METARLFIAFSLPDEVQQHLALIQKKLATMAPSDAFRWIHPGNTHITLHFLGDTPRDRIP
SVIDALRAAAIAIANQHAVTGAAGPKPTAVSDRRGIRCKLGGVGYFPHIDNPRVLWLGLN
EVTTRHSADLTAQGRAYFQSLEQELTARGLESSSPRYAPHITLGYRRRKANRSETAAVTA
AWQQYSSQGLIFSLQQIVLYESVVAQRGREHRRLHTQPLG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcccgtctgtttatcgcattctcgctgccggatgaggtgcagcagcatttg
gcactgatacagaaaaagctcgccaccatggccccttctgatgctttccgatggatacac
ccaggcaacacccacatcaccctgcattttctcggagacaccccgcgtgatcgcatacca
tcggtaatcgatgccctaagggctgcagccatcgcgatcgcgaaccagcatgctgttacc
ggtgctgccgggcccaaaccaacagctgtttccgaccgtcgcgggatacgatgcaaactt
ggcggtgttggctacttcccgcatatcgacaacccaagggtgctctggcttgggctgaac
gaggtaaccacccggcattcagccgacctgactgcacaaggtcgagcttactttcaatct
ctcgaacaggaactgactgcacgcggactcgaaagcagcagtccgcgttatgcgccgcac
attactttgggataccggcggcgcaaggccaaccgtagcgaaaccgctgcggttaccgca
gcctggcagcaatatagcagccaggggttgatcttttccctccagcagatcgtattgtac
gagagtgtagttgcccaacgaggtcgggaacaccgacgactgcatacccagccgcttggc
taa
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