Spirochaeta africana: Spiaf_1507
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Entry
Spiaf_1507 CDS
T01811
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sfc
Spirochaeta africana
Pathway
sfc00550
Peptidoglycan biosynthesis
sfc01100
Metabolic pathways
sfc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spiaf_1507
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spiaf_1507
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfc01011
]
Spiaf_1507
Enzymes [BR:
sfc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Spiaf_1507
Peptidoglycan biosynthesis and degradation proteins [BR:
sfc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Spiaf_1507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Peptidase_S13
DUF4851
Motif
Other DBs
NCBI-ProteinID:
AFG37566
UniProt:
H9UJ73
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All DBs
Position
1721535..1723406
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AA seq
623 aa
AA seq
DB search
MNSSVDRAHSPITSKFRTIIVLVIFLAITLVYALHLFSMQVVDQYVYLSRAEVTTRRSSP
IPAKRGEIYDRSYSEPLAGNALAFAVDFTPADAPNSEIPRILSELARLLDVSEDSLHRRV
PTRAYNSYNSIELAGNVNYRTIVQLSETIQQFPGVNFYSRPIRHYPHGSSMAHVLGFVGE
ITPEELQILFNQGYTAQSIIGKAGIERQYDSWLQGKDGRRYRRVDAQGRQVPDPTIEDVP
PELGHNLVLSIDARIQELAVNALGSRTGSAVVLKPSTGEILAMASYPSFDPTAFIGRDSQ
QVIARLSRDARAPFINRAAQAAGSPASTFKILLTAAALEEQVIGLNETINTRLYYQIGNR
RVGEHGASWRVSGFGPINLPQALTHSSNYFYAKLGHEYLGPDIIIDYAQRFGFGSQTGID
LPIETAGLLPDRDWKRRTTGEPWVGGDTVNLSLGQGFIETTPLQLANMIALIVNDGIVYT
PHLLKEIRDQETGRLVERRIPSISRTVQLSDETFQTTREAMRKVVSDGSTSSLFITPNLE
VAGKTGTGEVGLEDQWHSWFAAYAPYETDDPDEQVVVVVWVDASNEWEWWAPKAASIIFH
GIFNDFTYSETIEDLVRRRAWFL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttcggttgatcgcgcacattcaccgatcaccagcaagttcagaactatcatt
gttctggtaatctttcttgcgattacccttgtctatgcactgcatctgttttcgatgcag
gtagtggatcaatatgtatatttaagccgggcagaggtcactacccgtcgcagttcgccg
atcccggccaagcgcggagagatatacgatcgcagctattccgaacccttggccgggaac
gcgttggcgtttgcggttgattttacccctgccgatgccccgaacagcgaaataccgcgc
atactttccgagcttgcgcggttacttgatgtctccgaggacagtctgcaccgccgggtc
ccgacgcgggcctataactcctataactcgatcgaactggccggtaacgtgaactatcgt
actattgtccagctgtcggagaccattcagcaattccccggggtcaacttctacagccgc
ccgatacggcattatccgcatggcagcagcatggcccatgtgctgggctttgtaggagaa
ataacccccgaggagctgcagatactttttaaccagggatataccgcgcagtcgattatc
ggcaaggctggaatcgaacggcagtatgattcctggctccaggggaaagacggcaggcgc
tatcgacgggtagacgctcagggacgacaggttcctgatccgactatcgaggatgtacca
ccggagcttggtcacaacctggtgctgtcaatcgatgccagaattcaggagctcgcagtc
aatgcactcggttctcgcacggggtctgccgtggtgctcaagccttccaccggcgagatt
ctcgcgatggcttcgtatccaagctttgacccgaccgcgtttatcggccgcgactcccag
caggttattgcccgactgtcgcgagatgcgcgcgcaccctttattaaccgcgcagcccag
gctgccggttcaccggcatctacattcaagatcctgctgactgcagctgcactggaagag
caggtaatcggattgaacgaaacgataaatacccgcctgtactatcagatcggtaaccgc
agggtgggggagcatggcgccagctggcgcgtgagcgggtttggcccgataaacctgccg
caggcccttacacacagttccaactacttttacgccaagctgggccatgagtacctcggc
cctgatataatcatagactatgcccagcggttcggtttcggcagccaaacaggtatcgac
cttcccattgaaacagccggactgctgcctgatcgcgactggaaacgccgtaccaccggc
gagccctgggttggcggtgataccgttaatctttcacttggtcagggctttatcgaaaca
acacccctgcagctggcgaatatgatagcccttatcgtaaacgatggtattgtatacacc
ccgcatctgctcaaggagatccgggatcaggaaaccgggcggcttgttgaacgtcgtata
cccagcatatcccgaaccgtgcagctctcggacgaaaccttccagactacacgcgaggca
atgcgcaaggttgttagcgacggcagcaccagctcgctctttatcaccccaaacctggag
gtagccggaaaaaccggtaccggcgaggtggggctcgaggatcaatggcactcctggttt
gccgcttacgccccctacgaaactgatgacccggatgagcaggtggttgtggtggtctgg
gttgatgcatcgaatgaatgggaatggtgggcacccaaagccgccagcattatcttccat
ggtatttttaatgatttcacctatagcgaaactattgaggatctggttcgtagacgagcc
tggttcctgtaa
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